RNA–Protein interactions for RNA: ENST00000471913.5

AMPH-208, Transcript of amphiphysin, human

TSL 1 (best)

Gene AMPH, Length 1,778 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMPH-208	ENST00000471913	UBE2E3	Q969T4	207 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	MED8	Q96G25	268 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	PPP1R16A	Q96I34	528 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	COL21A1	Q96P44	957 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	BTBD2	Q9BX70	525 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	DCSTAMP	Q9H295	470 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	ZNF556	Q9HAH1	456 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	RASSF1	Q9NS23	344 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	CD84	Q9UIB8	345 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	DOLK	Q9UPQ8	538 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	ERVK-11	Q9UQG0	969 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	BTBD3	Q9Y2F9	522 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	WDR37	Q9Y2I8	494 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	PMF1-BGLAP	U3KQ54	211 aa		11.44	□□□□□ -0.58
AMPH-208	ENST00000471913	PLXNA2	O75051	1894 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	TMEM247	A6NEH6	219 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	CNOT3	O75175	753 aa	Known RBP	11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	KRT75	O95678	551 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	EIF2S1	P05198	315 aa	Known RBP	11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	RPLP0	P05388	317 aa	Known RBP	11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	DDX5	P17844	614 aa	Known RBP	11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	TPP2	P29144	1249 aa	Predicted RBP	11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	HMGA2	P52926	109 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	CRYBA2	P53672	197 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	ZNF45	Q02386	682 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	GAB1	Q13480	694 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	SMN1	Q16637	294 aa	Known RBP	11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	TIGD6	Q17RP2	521 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	CRB2	Q5IJ48	1285 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	PARM1	Q6UWI2	310 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	ZNF605	Q86T29	641 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	ARMC8	Q8IUR7	673 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	NAGS	Q8N159	534 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	NATD1	Q8N6N6	113 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	CHST14	Q8NCH0	376 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	FGF14	Q92915	247 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	SCAMP4	Q969E2	229 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	MRGPRX3	Q96LB0	322 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	OR4K3	Q96R72	315 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	PKP4	Q99569	1192 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	FEV	Q99581	238 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	MAPKAP1	Q9BPZ7	522 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	RIOK2	Q9BVS4	552 aa	Known RBP	11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	NXF2	Q9GZY0	626 aa	Known RBP	11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	MYNN	Q9NPC7	610 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	ITM2C	Q9NQX7	267 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	SH3BP4	Q9P0V3	963 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	DYRK1B	Q9Y463	629 aa		11.43	□□□□□ -0.58
AMPH-208	ENST00000471913	COL4A3	Q01955	1670 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	METTL15	A6NJ78	407 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	TMEM229A	B2RXF0	380 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	SOX1	O00570	391 aa	Predicted RBP	11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	TOR1B	O14657	336 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	NPC1	O15118	1278 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	TSPAN6	O43657	245 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	MAN1A2	O60476	641 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	GPR37L1	O60883	481 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	ATP6V1G1	O75348	118 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	SLC16A8	O95907	504 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	LCK	P06239	509 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	IGFBP4	P22692	258 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	XPA	P23025	273 aa	Predicted RBP	11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	EPHA2	P29317	976 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	EIF2D	P41214	584 aa	Known RBP	11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	CRAT	P43155	626 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	ALDH9A1	P49189	494 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	MVD	P53602	400 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	MLLT1	Q03111	559 aa	Predicted RBP	11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	RUNX3	Q13761	415 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	SCARB2	Q14108	478 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	TIMM50	Q3ZCQ8	353 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	BCL7A	Q4VC05	210 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
AMPH-208	ENST00000471913		Q6ZVL8	140 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	PAGE2	Q7Z2X7	111 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	SLC46A3	Q7Z3Q1	461 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	TECPR1	Q7Z6L1	1165 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	RNF175	Q8N4F7	328 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	KXD1	Q9BQD3	176 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	CNOT2	Q9NZN8	540 aa	Known RBP	11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	SLCO3A1	Q9UIG8	710 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	CD207	Q9UJ71	328 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	ANGPT4	Q9Y264	503 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	WBP11	Q9Y2W2	641 aa	Known RBP	11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	PCDHGA2	Q9Y5H1	932 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	KLK4	Q9Y5K2	254 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	MN1	Q10571	1320 aa	Predicted RBP	11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	KIAA1549L	Q6ZVL6	1849 aa		11.42	□□□□□ -0.58
AMPH-208	ENST00000471913	EFCAB10	A6NFE3	127 aa		11.41	□□□□□ -0.58
AMPH-208	ENST00000471913	OR2AG2	A6NM03	316 aa		11.41	□□□□□ -0.58
AMPH-208	ENST00000471913	FADS2P1	A8MWK0	482 aa		11.41	□□□□□ -0.58
AMPH-208	ENST00000471913	ANHX	E9PGG2	379 aa		11.41	□□□□□ -0.58
AMPH-208	ENST00000471913		H3BM21	787 aa		11.41	□□□□□ -0.58
AMPH-208	ENST00000471913	CACNB4	O00305	520 aa	Predicted RBP	11.41	□□□□□ -0.58
AMPH-208	ENST00000471913	MTX2	O75431	263 aa		11.41	□□□□□ -0.58
AMPH-208	ENST00000471913	GCM2	O75603	506 aa	Predicted RBP	11.41	□□□□□ -0.58
AMPH-208	ENST00000471913	UPK1B	O75841	260 aa		11.41	□□□□□ -0.58
AMPH-208	ENST00000471913	ETHE1	O95571	254 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms