RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 ZNF33BQ06732 778 aa11.71□□□□□ -0.53
CCNL1-213ENST00000471044 ACTN3Q08043 901 aaPredicted RBP11.71□□□□□ -0.53
CCNL1-213ENST00000471044 ZNF324BQ6AW86 544 aaPredicted RBP11.71□□□□□ -0.53
CCNL1-213ENST00000471044 C8orf74Q6P047 294 aa11.71□□□□□ -0.53
CCNL1-213ENST00000471044 FAM180AQ6UWF9 173 aa11.71□□□□□ -0.53
CCNL1-213ENST00000471044 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.71□□□□□ -0.53
CCNL1-213ENST00000471044 CA13Q8N1Q1 262 aa11.71□□□□□ -0.53
CCNL1-213ENST00000471044 BCORP1Q8N888 145 aa11.71□□□□□ -0.53
CCNL1-213ENST00000471044 WDR34Q96EX3 536 aa11.71□□□□□ -0.53
CCNL1-213ENST00000471044 PTCD3Q96EY7 689 aaKnown RBP11.71□□□□□ -0.53
CCNL1-213ENST00000471044 PTCHD1Q96NR3 888 aa11.71□□□□□ -0.53
CCNL1-213ENST00000471044 SLX1AQ9BQ83 275 aa11.71□□□□□ -0.53
CCNL1-213ENST00000471044 LRRC1Q9BTT6 524 aa11.71□□□□□ -0.53
CCNL1-213ENST00000471044 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.71□□□□□ -0.53
CCNL1-213ENST00000471044 KCNK13Q9HB14 408 aa11.71□□□□□ -0.53
CCNL1-213ENST00000471044 CD274Q9NZQ7 290 aa11.71□□□□□ -0.53
CCNL1-213ENST00000471044 ERRFI1Q9UJM3 462 aaPredicted RBP11.71□□□□□ -0.53
CCNL1-213ENST00000471044 RNF112Q9ULX5 631 aa11.71□□□□□ -0.53
CCNL1-213ENST00000471044 DIDO1Q9BTC0 2240 aaKnown RBP11.7□□□□□ -0.54
CCNL1-213ENST00000471044 ANKDD1BA6NHY2 528 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 POM121CA8CG34 1229 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 A8MUI8 341 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 PRAMEF4O60810 478 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 B4GALT2O60909 372 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 CLEC3AO75596 197 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 LDLRP01130 860 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 IGHA1P01876 353 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 SLC35E2BP0CK96 405 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 RNF224P0DH78 156 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 MYBL2P10244 700 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 CRABP2P29373 138 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 HNRNPH1P31943 449 aaKnown RBP11.7□□□□□ -0.54
CCNL1-213ENST00000471044 KCNC1P48547 511 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 BTG2P78543 158 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 DLG1Q12959 904 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 E2F2Q14209 437 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 SLMAPQ14BN4 828 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 EFTUD2Q15029 972 aaKnown RBP eCLIP11.7□□□□□ -0.541e-8■■■■■ 36.5
CCNL1-213ENST00000471044 MEP1AQ16819 746 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 ADPRMQ3LIE5 342 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 FBXO48Q5FWF7 155 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 ACER2Q5QJU3 275 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 PRAMEF9Q5VWM5 478 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 RAPH1Q70E73 1250 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 CMC1Q7Z7K0 106 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 ISCA2Q86U28 154 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 SUN3Q8TAQ9 357 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 STAG3L4Q8TBR4 150 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 ESAMQ96AP7 390 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 MS4A6EQ96DS6 147 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 ATOH8Q96SQ7 321 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 NPAS2Q99743 824 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 NPLQ9BXD5 320 aaPredicted RBP11.7□□□□□ -0.54
CCNL1-213ENST00000471044 NMRAL1Q9HBL8 299 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 ZDHHC18Q9NUE0 388 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 NUDT4Q9NZJ9 180 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 GDF2Q9UK05 429 aaPredicted RBP11.7□□□□□ -0.54
CCNL1-213ENST00000471044 ZNF490Q9ULM2 529 aaPredicted RBP11.7□□□□□ -0.54
CCNL1-213ENST00000471044 SLC5A6Q9Y289 635 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 PCDHGB6Q9Y5F9 930 aa11.7□□□□□ -0.54
CCNL1-213ENST00000471044 GTF3C1Q12789 2109 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 IGKV3D-11A0A0A0MRZ8 115 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 TCRBV16S1A1N1A0A5B0 115 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 ESYT3A0FGR9 886 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 A1L4Q6 167 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 LRIT2A6NDA9 550 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 PSMD12O00232 456 aaPredicted RBP11.69□□□□□ -0.54
CCNL1-213ENST00000471044 CCNT2O60583 730 aaKnown RBP11.69□□□□□ -0.54
CCNL1-213ENST00000471044 PRMT3O60678 531 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 PRAMEF2O60811 474 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 URI1O94763 535 aaPredicted RBP11.69□□□□□ -0.54
CCNL1-213ENST00000471044 RASAL1O95294 804 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 TBX6O95947 436 aaPredicted RBP11.69□□□□□ -0.54
CCNL1-213ENST00000471044 F10P00742 488 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 S100BP04271 92 aaPredicted RBP11.69□□□□□ -0.54
CCNL1-213ENST00000471044 LTA4HP09960 611 aaKnown RBP11.69□□□□□ -0.54
CCNL1-213ENST00000471044 TFEBP19484 476 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 HPDP32754 393 aaPredicted RBP11.69□□□□□ -0.54
CCNL1-213ENST00000471044 TDGF1P3P51864 188 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 RAB38P57729 211 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 BTN3A2P78410 334 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 LAPTM5Q13571 262 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 RUNX2Q13950 521 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 DOC2AQ14183 400 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 TBCCQ15814 346 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 PDK4Q16654 411 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 WHAMMP3Q1A5X7 153 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 XKR6Q5GH73 641 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 FCRLBQ6BAA4 426 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 LRRC70Q7Z2Q7 622 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 VN1R5Q7Z5H4 357 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 CCDC91Q7Z6B0 441 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 TBC1D1Q86TI0 1168 aaPredicted RBP11.69□□□□□ -0.54
CCNL1-213ENST00000471044 CRLF3Q8IUI8 442 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 BEST3Q8N1M1 668 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 DEPDC4Q8N2C3 294 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 MMGT1Q8N4V1 131 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 SNX31Q8N9S9 440 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 DNAJB8Q8NHS0 232 aa11.69□□□□□ -0.54
CCNL1-213ENST00000471044 ELP5Q8TE02 316 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms