RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 SRFBP1Q8NEF9 429 aaKnown RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 TRPV3Q8NET8 790 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 OR4C6Q8NH72 309 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 OR10G6Q8NH81 332 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 HUS1BQ8NHY5 278 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 WDR20Q8TBZ3 569 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 TSPEARQ8WU66 669 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 GATAD2BQ8WXI9 593 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ADAMTS14Q8WXS8 1223 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ZDHHC12Q96GR4 267 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 PPP1R36Q96LQ0 422 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 QRFPRQ96P65 431 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ZBTB18Q99592 522 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 DPYSL5Q9BPU6 564 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 DPH7Q9BTV6 452 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 NMUR2Q9GZQ4 415 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 GAREM1Q9H706 876 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ACTR5Q9H9F9 607 aaPredicted RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 LRTM1Q9HBL6 345 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 HRASLS2Q9NWW9 162 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 NDE1Q9NXR1 346 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 EPHA6Q9UF33 1036 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 RUVBL1Q9Y265 456 aaKnown RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 WBP11Q9Y2W2 641 aaKnown RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 CORINQ9Y5Q5 1042 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 CROCCQ5TZA2 2017 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 HECTD1Q9ULT8 2610 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 URADA6NGE7 173 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 ERICH4A6NGS2 130 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 BBIP1A8MTZ0 92 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 CAPN14A8MX76 684 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 H7BY64 318 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PSMD12O00232 456 aaPredicted RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 BTN3A3O00478 584 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 TXNDC9O14530 226 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 OR1F1O43749 312 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 DUX1O43812 170 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PRAMEF4O60810 478 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 SDC3O75056 442 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PEX11AO75192 247 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 SEC22BO75396 215 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 C1QL1O75973 258 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 UBOX5O94941 541 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 BPNT1O95861 308 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 UGT2B7P16662 529 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 POLR2CP19387 275 aaPredicted RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 CD22P20273 847 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PSMB5P28074 263 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 RPL3P39023 403 aaKnown RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 TSFMP43897 325 aaKnown RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 GSTM5P46439 218 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 ASMTP46597 345 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 CAPZBP47756 277 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PPM1FP49593 454 aaPredicted RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 HTR6P50406 440 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 CLNS1AP54105 237 aaKnown RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 MAZP56270 477 aaKnown RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 STXBP1P61764 594 aaKnown RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 CSNK1G2P78368 415 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 BNC1Q01954 994 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 RGS1Q08116 209 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 BNIP1Q12981 228 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 BNIP3Q12983 259 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 STX5Q13190 355 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 DDX39BQ13838 428 aaKnown RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 NR1D2Q14995 579 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 RBBP5Q15291 538 aaKnown RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 NR0B2Q15466 257 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 DPY19L1Q2PZI1 675 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 GALNTL6Q49A17 601 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PDCD4Q53EL6 469 aaKnown RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 LACTB2Q53H82 288 aaPredicted RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 ZC3H12BQ5HYM0 836 aaKnown RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 TCHHL1Q5QJ38 904 aaPredicted RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 MANEAQ5SRI9 462 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PRAMEF9Q5VWM5 478 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 ZNF425Q6IV72 752 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 Q6ZSR9 355 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PAGE2Q7Z2X7 111 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 KANSL1Q7Z3B3 1105 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PLXDC1Q8IUK5 500 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 SLC25A45Q8N413 288 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 KYQ8NBH2 561 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 GLB1L3Q8NCI6 653 aaPredicted RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 FBXO27Q8NI29 283 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 RP9Q8TA86 221 aaKnown RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 SAP25Q8TEE9 199 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PATE1Q8WXA2 126 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 RERGQ96A58 199 aaPredicted RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 AHCYL2Q96HN2 611 aaKnown RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 NSL1Q96IY1 281 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 C3orf30Q96M34 536 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PRAP1Q96NZ9 151 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 CATSPER2Q96P56 530 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 OR2A14Q96R47 310 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 MTERF1Q99551 399 aaKnown RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 SLC25A23Q9BV35 468 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 CCDC106Q9BWC9 280 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 NLNQ9BYT8 704 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 ACPTQ9BZG2 426 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms