RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 KBTBD12Q3ZCT8 623 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 LGSNQ5TDP6 509 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 MFSD4BQ5TF39 518 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 ARHGAP11AQ6P4F7 1023 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 UNC5DQ6UXZ4 953 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 RANBP10Q6VN20 620 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 MTDHQ86UE4 582 aaKnown RBP8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 SLC26A11Q86WA9 606 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 CCDC71Q8IV32 467 aaPredicted RBP8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 CHERPQ8IWX8 916 aaKnown RBP8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 OR4N4Q8N0Y3 316 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 LGI4Q8N135 537 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 MARVELD2Q8N4S9 558 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 CPSF7Q8N684 471 aaKnown RBP8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 PPM1NQ8N819 430 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 CFAP61Q8NHU2 1237 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 GSDMBQ8TAX9 411 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 MCOLN3Q8TDD5 553 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 ASZ1Q8WWH4 475 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 LRRC46Q96FV0 321 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 NSL1Q96IY1 281 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 PPP1R2P1Q96PQ5 205 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 FAM111AQ96PZ2 611 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 SMR3AQ99954 134 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 GPATCH1Q9BRR8 931 aaKnown RBP8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 TMEM120AQ9BXJ8 343 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 TEX264Q9Y6I9 313 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 COL6A5A8TX70 2615 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 A0A0G2JND7 137 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 TCRBV9S1A1TA0A576 114 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 H7C0S8 307 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 NME2P1O60361 137 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 PEX11AO75192 247 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 NEURL1O76050 574 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 MED26O95402 600 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 TGDSO95455 350 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 C8BP07358 591 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 DHRS4L1P0CG22 281 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 T-ENOLP0DO92 83 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 PKMP14618 531 aaKnown RBP8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 TFEBP19484 476 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 NME2P22392 152 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 CMPK1P30085 196 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 PTGER1P34995 402 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 PPARGP37231 505 aaPredicted RBP8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 CCNFP41002 786 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 ZFP36L2P47974 494 aaKnown RBP8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 SERPINB4P48594 390 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 CYB561P49447 251 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 ZNF140P52738 457 aaPredicted RBP8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 YBX1P67809 324 aaKnown RBP8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 CBLBQ13191 982 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 TAF11Q15544 211 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 DBN1Q16643 649 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 PRTGQ2VWP7 1150 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 DEFB113Q30KQ7 82 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 SHEQ5VZ18 495 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 ATG16L1Q676U5 607 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 PACS1Q6VY07 963 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 THSD4Q6ZMP0 1018 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 RNF44Q7L0R7 432 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 FGD2Q7Z6J4 655 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 LRRC6Q86X45 466 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 CDC20BQ86Y33 519 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 ZZZ3Q8IYH5 903 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 SLC22A15Q8IZD6 547 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 FAM13CQ8NE31 585 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 MCUQ8NE86 351 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 WFDC11Q8NEX6 87 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 OR5M3Q8NGP4 307 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 RERGQ96A58 199 aaPredicted RBP8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 RAD51AP1Q96B01 352 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 SLC7A6OSQ96CW6 309 aaPredicted RBP8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 C10orf90Q96M02 699 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 ANKRD27Q96NW4 1050 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 MIPEPQ99797 713 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 DRC3Q9H069 523 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 RNPEPL1Q9HAU8 725 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 MMP25Q9NPA2 562 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 NLE1Q9NVX2 485 aaPredicted RBP8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 STOX2Q9P2F5 926 aaPredicted RBP8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 HEY2Q9UBP5 337 aa8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 KLF13Q9Y2Y9 288 aaPredicted RBP8.37□□□□□ -1.07
SYNGAP1-205ENST00000470232 PHF3Q92576 2039 aaKnown RBP8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 FAM47E-STBD1D6RA91 191 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 H0YGG7 62 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 FFAR3O14843 346 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 GPR42O15529 346 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 ARHGEF9O43307 516 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 APOA4P06727 396 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 TPSB2P20231 275 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 HOXC12P31275 282 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 ADRA1AP35348 466 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 MAGEA6P43360 314 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 SERPINB9P50453 376 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 CSE1LP55060 971 aaKnown RBP8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 NUP107P57740 925 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 ARF3P61204 181 aaPredicted RBP8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 HSPA14Q0VDF9 509 aa8.36□□□□□ -1.07
SYNGAP1-205ENST00000470232 FAM53BQ14153 422 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms