RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 SCARB2Q14108 478 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 E2F2Q14209 437 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 CRB2Q5IJ48 1285 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 GRHL2Q6ISB3 625 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 ZNF517Q6ZMY9 492 aaPredicted RBP9.84□□□□□ -0.83
SMC4-210ENST00000469762 OR8H2Q8N162 312 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 ASCC1Q8N9N2 400 aaKnown RBP9.84□□□□□ -0.83
SMC4-210ENST00000469762 C17orf50Q8WW18 174 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 HIST1H2AHQ96KK5 128 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 WDFY2Q96P53 400 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 IL4I1Q96RQ9 567 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 PIP5K1AQ99755 562 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 HIST1H2AJQ99878 128 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 H2AFJQ9BTM1 129 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 MCOLN1Q9GZU1 580 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 KCND3Q9UK17 655 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 TRBV4-1A0A0J9YWV2 114 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 TP53P04637 393 aaPredicted RBP9.84□□□□□ -0.83
SMC4-210ENST00000469762 CTSAP10619 480 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 AZGP1P25311 298 aaKnown RBP9.84□□□□□ -0.83
SMC4-210ENST00000469762 ITGB7P26010 798 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 SSTR4P31391 388 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 CRISP1P54107 249 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 DEFA1P59665 94 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 DEFA3P59666 94 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 PCDH1Q08174 1060 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 DMPKQ09013 629 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 CDH18Q13634 790 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 MMP21Q8N119 569 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 FLCNQ8NFG4 579 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 OR5AK3PQ8NH89 298 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 C9orf43Q8TAL5 461 aaPredicted RBP9.84□□□□□ -0.83
SMC4-210ENST00000469762 SETD6Q8TBK2 473 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 SLC35A5Q9BS91 424 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 TMEM38AQ9H6F2 299 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 TIGARQ9NQ88 270 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 ABCB8Q9NUT2 735 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 TRPM5Q9NZQ8 1165 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 NDOR1Q9UHB4 597 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 ATP6V1HQ9UI12 483 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 GRIP1Q9Y3R0 1128 aa9.84□□□□□ -0.83
SMC4-210ENST00000469762 SH3D21A4FU49 640 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 EFCAB10A6NFE3 127 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 PLD2O14939 933 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 SLC16A5O15375 505 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 SEC14L5O43304 696 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 CCNB2O95067 398 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 KRT8P05787 483 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 PIPP12273 146 aaPredicted RBP9.83□□□□□ -0.84
SMC4-210ENST00000469762 CD72P21854 359 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 SOX6P35712 828 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 AP1S2P56377 157 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 HOXC5Q00444 222 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 SP140Q13342 867 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 KRR1Q13601 381 aaKnown RBP9.83□□□□□ -0.84
SMC4-210ENST00000469762 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.83□□□□□ -0.842e-41■■■■■ 207.1
SMC4-210ENST00000469762 TBRG1Q3YBR2 411 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 IER5LQ5T953 404 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 OR52N2Q8NGI0 321 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 LMLNQ96KR4 655 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 WRAP53Q9BUR4 548 aaKnown RBP9.83□□□□□ -0.84
SMC4-210ENST00000469762 BRF2Q9HAW0 419 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 IMPAD1Q9NX62 359 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 SH3BP4Q9P0V3 963 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 STOX2Q9P2F5 926 aaPredicted RBP9.83□□□□□ -0.84
SMC4-210ENST00000469762 SNX11Q9Y5W9 270 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 USP34Q70CQ2 3546 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 TPST2O60704 377 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 SLCO2B1O94956 709 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 CYP17A1P05093 508 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 OR56A5P0C7T3 313 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 CST5P28325 142 aaPredicted RBP9.83□□□□□ -0.84
SMC4-210ENST00000469762 TIE1P35590 1138 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 SPINT3P49223 89 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 PTPN5P54829 565 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 RPS13P62277 151 aaKnown RBP9.83□□□□□ -0.84
SMC4-210ENST00000469762 ZNF33BQ06732 778 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 PLEKHS1Q5SXH7 462 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 FAM180BQ6P0A1 224 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 CEACAM20Q6UY09 585 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 ABI3BPQ7Z7G0 1075 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 HJURPQ8NCD3 748 aaPredicted RBP9.83□□□□□ -0.84
SMC4-210ENST00000469762 OR2AP1Q8NGE2 309 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 SCAMP4Q969E2 229 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 PHOX2BQ99453 314 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 TMEM246Q9BRR3 403 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 SGK2Q9HBY8 427 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 RANGRFQ9HD47 186 aaPredicted RBP9.83□□□□□ -0.84
SMC4-210ENST00000469762 ZNF282Q9UDV7 671 aaPredicted RBP9.83□□□□□ -0.84
SMC4-210ENST00000469762 PLEKHB1Q9UF11 243 aaPredicted RBP9.83□□□□□ -0.84
SMC4-210ENST00000469762 A0A0G2JMP0 313 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 HEPACAM2A8MVW5 462 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 ZNF670-ZNF695F2Z2N8 137 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 PLA2G10O15496 165 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 PSIP1O75475 530 aaKnown RBP9.83□□□□□ -0.84
SMC4-210ENST00000469762 FHP07954 510 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 CLEC2LP0C7M8 214 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 IMPA1P29218 277 aa9.83□□□□□ -0.84
SMC4-210ENST00000469762 TIA1P31483 386 aaKnown RBP eCLIP9.83□□□□□ -0.842e-7■■■□□ 18.7
SMC4-210ENST00000469762 CCL23P55773 120 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms