RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 NECTIN3Q9NQS3 549 aa8.5□□□□□ -1.05
ABCF3-205ENST00000466416 CATSPERZQ9NTU4 200 aa8.5□□□□□ -1.05
ABCF3-205ENST00000466416 ZFATQ9P243 1243 aa8.5□□□□□ -1.05
ABCF3-205ENST00000466416 ZNF223Q9UK11 482 aaPredicted RBP8.5□□□□□ -1.05
ABCF3-205ENST00000466416 VPS9D1Q9Y2B5 631 aa8.5□□□□□ -1.05
ABCF3-205ENST00000466416 EFR3BQ9Y2G0 817 aa8.5□□□□□ -1.05
ABCF3-205ENST00000466416 ANK2Q01484 3957 aa8.5□□□□□ -1.05
ABCF3-205ENST00000466416 ANK3Q12955 4377 aaKnown RBP8.5□□□□□ -1.05
ABCF3-205ENST00000466416 CUBNO60494 3623 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 CD8B2A6NJW9 211 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 H3BMM5 538 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 PSMD12O00232 456 aaPredicted RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 CD3EAPO15446 510 aaKnown RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 CD5LO43866 347 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 PRKNO60260 465 aaPredicted RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 LCMT2O60294 686 aaKnown RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 TMCC2O75069 709 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 AVILO75366 819 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 ERN1O75460 977 aaKnown RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 NDUFS3O75489 264 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 SOX30O94993 753 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 FAM157CP0CG43 387 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 RNH1P13489 461 aaKnown RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 ADRA1DP25100 572 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 DNASE1L1P49184 302 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 COPS2P61201 443 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 TBL3Q12788 808 aaKnown RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 CDH17Q12864 832 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 TNK1Q13470 666 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 PWP1Q13610 501 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 CAPRIN1Q14444 709 aaKnown RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 RPS6KA1Q15418 735 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 KLHL38Q2WGJ6 581 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 P3H1Q32P28 736 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 KRTAP24-1Q3LI83 254 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 BBS9Q3SYG4 887 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 DEFB134Q4QY38 66 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 OPN5Q6U736 354 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 MPP5Q8N3R9 675 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 MFSD9Q8NBP5 474 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 ZNF740Q8NDX6 193 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 WDR83Q9BRX9 315 aaKnown RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 AMBRA1Q9C0C7 1298 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 LIN28AQ9H9Z2 209 aaKnown RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 UBTD1Q9HAC8 227 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 SEMA4BQ9NPR2 832 aaPredicted RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 YAE1D1Q9NRH1 226 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 PNO1Q9NRX1 252 aaKnown RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 TRMT1Q9NXH9 659 aaKnown RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 TSR3Q9UJK0 312 aaKnown RBP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.49□□□□□ -1.05
ABCF3-205ENST00000466416 ATG4BQ9Y4P1 393 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 MMACHCQ9Y4U1 282 aa8.49□□□□□ -1.05
ABCF3-205ENST00000466416 DSCAMO60469 2012 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 MACROD2A1Z1Q3 448 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 MBD3L3A6NE82 208 aaPredicted RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 KDM4EB2RXH2 506 aaPredicted RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 WWP2O00308 870 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 CTIFO43310 598 aaKnown RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 METTL18O95568 372 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 NID1P14543 1247 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 COILP38432 576 aaPredicted RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 AGFG1P52594 562 aaKnown RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 EIF3BP55884 814 aaKnown RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 WNT3P56703 355 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 OLR1P78380 273 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 TCEAL1Q15170 157 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 PHKG1Q16816 387 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 ASTE1Q2TB18 679 aaPredicted RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 SLC22A10Q63ZE4 541 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 HSDL2Q6YN16 418 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 PLEKHM3Q6ZWE6 761 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 LRRC25Q8N386 305 aaPredicted RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 RASGEF1CQ8N431 466 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 TC2NQ8N9U0 490 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 OR52K1Q8NGK4 314 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 MBD3L2Q8NHZ7 208 aaPredicted RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 ZNF778Q96MU6 729 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 TIMP4Q99727 224 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 PRDM14Q9GZV8 571 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 ZNF703Q9H7S9 590 aaPredicted RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 CALHM2Q9HA72 323 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 ZFP64Q9NPA5 681 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 CCDC177Q9NQR7 707 aaPredicted RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 ZNF701Q9NV72 531 aaPredicted RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 GALNT8Q9NY28 637 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 ZNF226Q9NYT6 803 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 C6orf203Q9P0P8 240 aaPredicted RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 MARCH4Q9P2E8 410 aaPredicted RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 BOKQ9UMX3 212 aaPredicted RBP8.48□□□□□ -1.05
ABCF3-205ENST00000466416 TESMINQ9Y4I5 508 aa8.48□□□□□ -1.05
ABCF3-205ENST00000466416 A0A087X1B8 175 aa8.47□□□□□ -1.05
ABCF3-205ENST00000466416 C15orf38-AP3S2A0A0A6YYH1 394 aa8.47□□□□□ -1.05
ABCF3-205ENST00000466416 SYNDIG1LA6NDD5 238 aa8.47□□□□□ -1.05
ABCF3-205ENST00000466416 GOLGA6L9A6NEM1 432 aa8.47□□□□□ -1.05
ABCF3-205ENST00000466416 ERI2A8K979 691 aaKnown RBP8.47□□□□□ -1.05
ABCF3-205ENST00000466416 DEFB108AA8MXU0 73 aa8.47□□□□□ -1.05
ABCF3-205ENST00000466416 AKR1B15C9JRZ8 316 aaPredicted RBP8.47□□□□□ -1.05
ABCF3-205ENST00000466416 NDUFS4O43181 175 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms