RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PLGLB1Q02325 96 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 TAP2Q03519 686 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 RPA4Q13156 261 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 PKP1Q13835 747 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 VEZF1Q14119 521 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 BOP1Q14137 746 aaKnown RBP5.43□□□□□ -1.54
NCL-208ENST00000466274 GAGE13Q4V321 117 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 CCDC38Q502W7 563 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 RABL3Q5HYI8 236 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 WASHC2DQ5SRD0 308 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 PRAMEF9Q5VWM5 478 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 FBXO42Q6P3S6 717 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 FIGLAQ6QHK4 219 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 DET1Q7L5Y6 550 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 NOP9Q86U38 636 aaKnown RBP5.43□□□□□ -1.54
NCL-208ENST00000466274 CAND1Q86VP6 1230 aaKnown RBP5.43□□□□□ -1.54
NCL-208ENST00000466274 SLC22A16Q86VW1 577 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 RPS19BP1Q86WX3 136 aaKnown RBP5.43□□□□□ -1.54
NCL-208ENST00000466274 CREBRFQ8IUR6 639 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 OR52N2Q8NGI0 321 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 SLC30A5Q8TAD4 765 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 ARRDC2Q8TBH0 407 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 SLC25A43Q8WUT9 341 aaPredicted RBP5.43□□□□□ -1.54
NCL-208ENST00000466274 HEXDCQ8WVB3 486 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 TMEM171Q8WVE6 324 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 SLCO2A1Q92959 643 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 ZUFSPQ96AP4 578 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 SARAFQ96BY9 339 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 ZNF285Q96NJ3 590 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 MCEEQ96PE7 176 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 REG4Q9BYZ8 158 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 SHARPINQ9H0F6 387 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 DEFB127Q9H1M4 99 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 TRABDQ9H4I3 376 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 TRIM45Q9H8W5 580 aaPredicted RBP5.43□□□□□ -1.54
NCL-208ENST00000466274 UBTD1Q9HAC8 227 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 BPIFA1Q9NP55 256 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 IL26Q9NPH9 171 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 ALKBH4Q9NXW9 302 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 SPHK1Q9NYA1 384 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 CWC15Q9P013 229 aaKnown RBP5.43□□□□□ -1.54
NCL-208ENST00000466274 SAMD15Q9P1V8 674 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 PCSK1NQ9UHG2 260 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 HOOK1Q9UJC3 728 aaKnown RBP5.43□□□□□ -1.54
NCL-208ENST00000466274 RCOR1Q9UKL0 485 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 TMPRSS11EQ9UL52 423 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 ICKQ9UPZ9 632 aa5.43□□□□□ -1.54
NCL-208ENST00000466274 DOCK4Q8N1I0 1966 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 GLYATL1P3A0A0U1RQE8 302 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 TARM1B6A8C7 271 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 UGT1A9O60656 530 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 FKBP9O95302 570 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 PIRTP0C851 137 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 PNMA6AP0CW24 399 aaPredicted RBP5.42□□□□□ -1.54
NCL-208ENST00000466274 ATP1A3P13637 1013 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 EGR1P18146 543 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 SRD5A1P18405 259 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 UGT1A6P19224 532 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 HMGCLP35914 325 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 RFC3P40938 356 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 HLCSP50747 726 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 EFNA3P52797 238 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 ATP5J2P56134 94 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 PPIAP62937 165 aaKnown RBP5.42□□□□□ -1.54
NCL-208ENST00000466274 CDR2Q01850 454 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 ACTN3Q08043 901 aaPredicted RBP5.42□□□□□ -1.54
NCL-208ENST00000466274 NIPAL4Q0D2K0 466 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 TRIM14Q14142 442 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 BECN1Q14457 450 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 SF3B4Q15427 424 aaKnown RBP eCLIP5.42□□□□□ -1.544e-68■■■■□ 21.9
NCL-208ENST00000466274 CA9Q16790 459 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 CLEC12BQ2HXU8 276 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 CCDC122Q5T0U0 273 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 NDUFAF5Q5TEU4 345 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 MBNL2Q5VZF2 373 aaKnown RBP5.42□□□□□ -1.54
NCL-208ENST00000466274 RTL6Q6ICC9 239 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 KLHL10Q6JEL2 608 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 DPY19L2P1Q6NXN4 242 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 PLEKHM3Q6ZWE6 761 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 OTOAQ7RTW8 1153 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 TBC1D21Q8IYX1 336 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 MAPK1IP1LQ8NDC0 245 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 MAML1Q92585 1016 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 FATE1Q969F0 183 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 SMARCE1Q969G3 411 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 CABS1Q96KC9 395 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 C16orf92Q96LL3 132 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 CLUHP3Q96NS8 147 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 CYTH2Q99418 400 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 SNRNP25Q9BV90 132 aaKnown RBP5.42□□□□□ -1.54
NCL-208ENST00000466274 GOLPH3LQ9H4A5 285 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 CDCP1Q9H5V8 836 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 ASB8Q9H765 288 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 UGT1A7Q9HAW7 530 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 UGT1A10Q9HAW8 530 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 UGT1A8Q9HAW9 530 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 SMOXQ9NWM0 555 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 ASF1AQ9Y294 204 aa5.42□□□□□ -1.54
NCL-208ENST00000466274 TDRKHQ9Y2W6 561 aaKnown RBP5.42□□□□□ -1.54
NCL-208ENST00000466274 PKP3Q9Y446 797 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms