RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 GABRR3A8MPY1 467 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 PCDH17O14917 1159 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 PLA2G10O15496 165 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 ENTPD6O75354 484 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 TNFRSF21O75509 655 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 DDNO94850 711 aaPredicted RBP18.91■□□□□ 0.62
SDF4-205ENST00000465727 CCNYL3P0C7X3 344 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 POU2F1P14859 743 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 ATP5C1P36542 298 aaKnown RBP18.91■□□□□ 0.62
SDF4-205ENST00000465727 CRATP43155 626 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 RHOAP61586 193 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 AP1S1P61966 158 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 CHIT1Q13231 466 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 SP140Q13342 867 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 TATDN3Q17R31 274 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 ESCO2Q56NI9 601 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 GCNT6Q5T4J0 391 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 ZNF783Q6ZMS7 281 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 SERINC5Q86VE9 423 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 TRMT61AQ96FX7 289 aaKnown RBP18.91■□□□□ 0.62
SDF4-205ENST00000465727 FAM193BQ96PV7 902 aaPredicted RBP18.91■□□□□ 0.62
SDF4-205ENST00000465727 ADAM2Q99965 735 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 MED18Q9BUE0 208 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 POLR2J2Q9GZM3 115 aaKnown RBP18.91■□□□□ 0.62
SDF4-205ENST00000465727 TMEM38AQ9H6F2 299 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 C12orf71A8MTZ7 269 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 SYN3O14994 580 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 SHOXO15266 292 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 NOS1APO75052 506 aaPredicted RBP18.91■□□□□ 0.62
SDF4-205ENST00000465727 CDRT1O95170 752 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 RHCEP18577 417 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 SPAM1P38567 509 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 SLC9A3P48764 834 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 ZXDBP98169 803 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 SCARB2Q14108 478 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 PYDC2Q56P42 97 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 DGKKQ5KSL6 1271 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 MZT2BQ6NZ67 158 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 IDO2Q6ZQW0 420 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 PHC2Q8IXK0 858 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 ADGRG2Q8IZP9 1017 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 CBARPQ8N350 705 aaPredicted RBP18.91■□□□□ 0.62
SDF4-205ENST00000465727 CAMKK1Q8N5S9 505 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 DUSP18Q8NEJ0 188 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 CDC26Q8NHZ8 85 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 CXorf40BQ96DE9 158 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 PLEKHB1Q9UF11 243 aaPredicted RBP18.91■□□□□ 0.62
SDF4-205ENST00000465727 AFF4Q9UHB7 1163 aaKnown RBP18.91■□□□□ 0.62
SDF4-205ENST00000465727 SLC22A14Q9Y267 594 aa18.91■□□□□ 0.62
SDF4-205ENST00000465727 A0A1W2PQ72 361 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 PRAMEF25A6NGN4 478 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 OR6C75A6NL08 312 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 AGAP14A8MT82 685 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 TLR4O00206 839 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 SLC16A5O15375 505 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 PRAMEF4O60810 478 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 ADAP00813 363 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 GPC1P35052 558 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 MAP2K3P46734 347 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 MVDP53602 400 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 AP1S2P56377 157 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 RAB25P57735 213 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 CTXN3Q4LDR2 81 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 CRB2Q5IJ48 1285 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 PRAMEF9Q5VWM5 478 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 GDF6Q6KF10 455 aaPredicted RBP18.9■□□□□ 0.62
SDF4-205ENST00000465727 LINGO4Q6UY18 593 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 OR52N2Q8NGI0 321 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 OR4A15Q8NGL6 344 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 GOT1L1Q8NHS2 421 aaPredicted RBP18.9■□□□□ 0.62
SDF4-205ENST00000465727 WDR20Q8TBZ3 569 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 ZNF717Q9BY31 904 aaPredicted RBP18.9■□□□□ 0.62
SDF4-205ENST00000465727 ANKRA2Q9H9E1 313 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 RBFOX1Q9NWB1 397 aaKnown RBP18.9■□□□□ 0.62
SDF4-205ENST00000465727 TXNL4BQ9NX01 149 aaKnown RBP18.9■□□□□ 0.62
SDF4-205ENST00000465727 ENPP4Q9Y6X5 453 aa18.9■□□□□ 0.62
SDF4-205ENST00000465727 OR2B3O76000 313 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 CSF2P04141 144 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 CKMT1AP12532 417 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 BPIP17213 487 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 PTPN5P54829 565 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 HNRNPA0Q13151 305 aaKnown RBP18.89■□□□□ 0.62
SDF4-205ENST00000465727 CHRNA6Q15825 494 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.89■□□□□ 0.622e-7■□□□□ 11.1
SDF4-205ENST00000465727 ZNF648Q5T619 568 aaPredicted RBP18.89■□□□□ 0.62
SDF4-205ENST00000465727 CXorf57Q6NSI4 855 aaKnown RBP18.89■□□□□ 0.62
SDF4-205ENST00000465727 RGMBQ6NW40 437 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 ZNF598Q86UK7 904 aaKnown RBP18.89■□□□□ 0.62
SDF4-205ENST00000465727 DENND1CQ8IV53 801 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 FBXO22Q8NEZ5 403 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 ASB11Q8WXH4 323 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 BHMTQ93088 406 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 NMNAT1Q9HAN9 279 aaPredicted RBP18.89■□□□□ 0.62
SDF4-205ENST00000465727 BRF2Q9HAW0 419 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 KCNN3Q9UGI6 736 aa18.89■□□□□ 0.62
SDF4-205ENST00000465727 MYL12BO14950 172 aa18.89■□□□□ 0.61
SDF4-205ENST00000465727 GASTP01350 101 aa18.89■□□□□ 0.61
SDF4-205ENST00000465727 HBQ1P09105 142 aa18.89■□□□□ 0.61
SDF4-205ENST00000465727 MPC1LP0DKB6 136 aa18.89■□□□□ 0.61
SDF4-205ENST00000465727 ZNF30P17039 623 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms