RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 H3BMH7 237 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 NDUFS4O43181 175 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 SH3BGRLO75368 114 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 EEDO75530 441 aaKnown RBP16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 ACADSP16219 412 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 PTX3P26022 381 aaPredicted RBP16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 ZFP36L2P47974 494 aaKnown RBP16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 ACY1Q03154 408 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 TAF11Q15544 211 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 MUM1Q2TAK8 710 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 HKDC1Q2TB90 917 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 DHDDSQ86SQ9 333 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 CSNK1A1LQ8N752 337 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 CAMKVQ8NCB2 501 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 OR1L3Q8NH93 324 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 NT5CQ8TCD5 201 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 PYDC1Q8WXC3 89 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 N4BP2L2Q92802 583 aaPredicted RBP16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 ZNF501Q96CX3 271 aaPredicted RBP16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 CMTM7Q96FZ5 175 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 RSRC1Q96IZ7 334 aaKnown RBP16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 MS4A8Q9BY19 250 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 STRADBQ9C0K7 418 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 AICDAQ9GZX7 198 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 SPRTNQ9H040 489 aaPredicted RBP16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 OR51B5Q9H339 312 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 PRM3Q9NNZ6 103 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 DLL3Q9NYJ7 618 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 MCM8Q9UJA3 840 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 KIF26BQ2KJY2 2108 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 SEC16AO15027 2179 aa16.09■□□□□ 0.17
EXOSC3-203ENST00000465229 EFCAB7A8K855 629 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 NPIPB8E9PQR5 432 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 H3BNX3 289 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 CCL4P13236 92 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 HSD3B1P14060 373 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 ATP6V1C1P21283 382 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 HSD3B2P26439 372 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 PHEXP78562 749 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 MS4A2Q01362 244 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 HMGCS1Q01581 520 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 NR6A1Q15406 480 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 VPS26BQ4G0F5 336 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 TCTE1Q5JU00 501 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 DEPDC1Q5TB30 811 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 DGLUCYQ7Z3D6 616 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 TMPRSS12Q86WS5 348 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 TMEM126BQ8IUX1 230 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 CACTIN-AS1Q8N1I8 211 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 BMPERQ8N8U9 685 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 KCT2Q8NC54 265 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 ADAMTS14Q8WXS8 1223 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 NAF1Q96HR8 494 aaKnown RBP16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 OR6C1Q96RD1 312 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 F2RL3Q96RI0 385 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 CMKLR1Q99788 373 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 SLC6A16Q9GZN6 736 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 VCX3BQ9H321 246 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 KLHL31Q9H511 634 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 ENAMQ9NRM1 1142 aa16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 C6orf203Q9P0P8 240 aaPredicted RBP16.08■□□□□ 0.17
EXOSC3-203ENST00000465229 CASQ2O14958 399 aaPredicted RBP16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 HYAL3O43820 417 aaPredicted RBP16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 BAG2O95816 211 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 SLC35G6P0C7Q6 338 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 JAK1P23458 1154 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 PLA2G5P39877 138 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 POLR2JP52435 117 aaKnown RBP16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 RGS1Q08116 209 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 CSTF3Q12996 717 aaKnown RBP16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 AP5B1Q2VPB7 878 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 PRTGQ2VWP7 1150 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 ADPRMQ3LIE5 342 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 MANEAQ5SRI9 462 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 KHDRBS2Q5VWX1 349 aaKnown RBP16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 ZFAND4Q86XD8 727 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 PROKR1Q8TCW9 393 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 LIN37Q96GY3 246 aaPredicted RBP16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 ZNF570Q96NI8 536 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 AKAP7Q9P0M2 348 aaPredicted RBP16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 VPS29Q9UBQ0 182 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 LEF1Q9UJU2 399 aaPredicted RBP16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 SERTAD3Q9UJW9 196 aa16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 RUVBL1Q9Y265 456 aaKnown RBP16.08■□□□□ 0.16
EXOSC3-203ENST00000465229 FITM1A5D6W6 292 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 FXYD1O00168 92 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 SAP18O00422 153 aaKnown RBP16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 TXNDC9O14530 226 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 ANKRD28O15084 1053 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 ZSCAN9O15535 394 aaPredicted RBP16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 OR2B3O76000 313 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 PRPH2P23942 346 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 NME5P56597 212 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 UFM1P61960 85 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 SNRPNP63162 240 aaKnown RBP16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 MC2RQ01718 297 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 TARDBPQ13148 414 aaKnown RBP eCLIP16.07■□□□□ 0.161e-7■■■□□ 15
EXOSC3-203ENST00000465229 COL9A2Q14055 689 aaPredicted RBP16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 RAB11FIP2Q7L804 512 aa16.07■□□□□ 0.16
EXOSC3-203ENST00000465229 UBE3DQ7Z6J8 389 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms