RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 RMI1Q9H9A7 625 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 DNMT3BQ9UBC3 853 aaKnown RBP12.33□□□□□ -0.44
NUP58-206ENST00000463407 POFUT2Q9Y2G5 429 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 TRPM3Q9HCF6 1732 aaPredicted RBP12.33□□□□□ -0.44
NUP58-206ENST00000463407 CH25HO95992 272 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 OR12D1P0DN82 309 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 GJA8P48165 433 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 CDKN2DP55273 166 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 VBP1P61758 197 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 HTR3DQ70Z44 454 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 SPATC1Q76KD6 591 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 NPWQ8N729 165 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 C3orf58Q8NDZ4 430 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 HSH2DQ96JZ2 352 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 ZNF382Q96SR6 550 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 C4AP0C0L4 1744 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 ZNF670-ZNF695F2Z2N8 137 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 TSPAN5P62079 268 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 FGL2Q14314 439 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 GRM7Q14831 915 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 RELL1Q8IUW5 271 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 NAXEQ8NCW5 288 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 OR2L3Q8NG85 312 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 DOK4Q8TEW6 326 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 CANT1Q8WVQ1 401 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 B3GNT4Q9C0J1 378 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 ZNF334Q9HCZ1 680 aaPredicted RBP12.33□□□□□ -0.44
NUP58-206ENST00000463407 MARCH4Q9P2E8 410 aaPredicted RBP12.33□□□□□ -0.44
NUP58-206ENST00000463407 UPB1Q9UBR1 384 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 WRBO00258 174 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 INMTO95050 263 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 RPLP0P05388 317 aaKnown RBP12.33□□□□□ -0.44
NUP58-206ENST00000463407 CD6P30203 668 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 GSK3BP49841 420 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 SELENOVP59797 346 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 DEFB110Q30KQ9 67 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 AKIRIN2Q53H80 203 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 RAET1LQ5VY80 246 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 ZNF550Q7Z398 422 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 MEIOBQ8N635 442 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 OR5L2Q8NGL0 311 aa12.33□□□□□ -0.44
NUP58-206ENST00000463407 GPN1Q9HCN4 374 aaPredicted RBP12.33□□□□□ -0.44
NUP58-206ENST00000463407 ZNF99A8MXY4 864 aaPredicted RBP12.32□□□□□ -0.44
NUP58-206ENST00000463407 E7EQ34 232 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 CER1O95813 267 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 OR2B6P58173 313 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 ERVFC1P60507 584 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 MERTKQ12866 999 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 OR2T5Q6IEZ7 315 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 TMEM107Q6UX40 140 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 LRRC25Q8N386 305 aaPredicted RBP12.32□□□□□ -0.44
NUP58-206ENST00000463407 OR2T29Q8NH02 315 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 CAPSLQ8WWF8 208 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 OR5P2Q8WZ92 322 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 SCRN2Q96FV2 425 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 NSUN5Q96P11 429 aaKnown RBP12.32□□□□□ -0.44
NUP58-206ENST00000463407 OR1F2PQ96R84 312 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 TIGARQ9NQ88 270 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 A0A1B0GVT2 93 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 C1orf226A1L170 272 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 CREG1O75629 220 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 RFPL1O75677 317 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 FGF3P11487 239 aaPredicted RBP12.32□□□□□ -0.44
NUP58-206ENST00000463407 TNFRSF4P43489 277 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 SMSP52788 366 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 PMS2P3Q13401 168 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 IDNKQ5T6J7 187 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 UNC5DQ6UXZ4 953 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 LRRC69Q6ZNQ3 347 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 RLN3Q8WXF3 142 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 PELOQ9BRX2 385 aaKnown RBP12.32□□□□□ -0.44
NUP58-206ENST00000463407 RPF2Q9H7B2 306 aaKnown RBP12.32□□□□□ -0.44
NUP58-206ENST00000463407 SLC7A8Q9UHI5 535 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 FKBP7Q9Y680 259 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 BHMG1C9JSJ3 638 aaPredicted RBP12.32□□□□□ -0.44
NUP58-206ENST00000463407 PLD2O14939 933 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 TFECO14948 347 aaPredicted RBP12.32□□□□□ -0.44
NUP58-206ENST00000463407 MYOGP15173 224 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 ITGB7P26010 798 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 CTBP2P56545 445 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 FOXK1P85037 733 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 FAM78AQ5JUQ0 283 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 C10orf62Q5T681 223 aaPredicted RBP12.32□□□□□ -0.44
NUP58-206ENST00000463407 ATOH1Q92858 354 aaPredicted RBP12.32□□□□□ -0.44
NUP58-206ENST00000463407 BORCS5Q969J3 196 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 DNAJA3Q96EY1 480 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 SIT1Q9Y3P8 196 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 NUMBLQ9Y6R0 609 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 P04436 131 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 IFI30P13284 250 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 HMGCLP35914 325 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 RPS6KA3P51812 740 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 DMPKQ09013 629 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 FCHO2Q0JRZ9 810 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 PPP1R3AQ16821 1122 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 TECRLQ5HYJ1 363 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 ZNF627Q7L945 461 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 LINC00471Q8N535 108 aa12.32□□□□□ -0.44
NUP58-206ENST00000463407 UCK2Q9BZX2 261 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms