RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CCNYL2Q5T2Q4 361 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 FAM71E1Q6IPT2 247 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 RHBDD2Q6NTF9 364 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 RIPOR1Q6ZS17 1223 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 RAB11FIP2Q7L804 512 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 PPP1R3BQ86XI6 285 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 SHISA5Q8N114 240 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 TTC29Q8NA56 475 aaPredicted RBP13.59□□□□□ -0.23
COL6A1-202ENST00000463060 OR9A4Q8NGU2 314 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 MVB12AQ96EY5 273 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 RTKNQ9BST9 563 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 NPLQ9BXD5 320 aaPredicted RBP13.59□□□□□ -0.23
COL6A1-202ENST00000463060 EBPLQ9BY08 206 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 ANKHQ9HCJ1 492 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 MYNNQ9NPC7 610 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 SLC52A3Q9NQ40 469 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 ZIM2Q9NZV7 527 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 LOXL2Q9Y4K0 774 aa13.59□□□□□ -0.23
COL6A1-202ENST00000463060 SEC16AO15027 2179 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 CCDC187A0A096LP49 1063 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 A0A0A6YYC8 382 aaPredicted RBP13.58□□□□□ -0.24
COL6A1-202ENST00000463060 PMS2P1A4D2B8 440 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 H0YIG0 161 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 I3L1I5 382 aaPredicted RBP13.58□□□□□ -0.24
COL6A1-202ENST00000463060 POLR1CO15160 346 aaPredicted RBP13.58□□□□□ -0.24
COL6A1-202ENST00000463060 PROM1O43490 865 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 PRMT3O60678 531 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 JAK1P23458 1154 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 CERS1P27544 350 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 ASMTP46597 345 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 MAPK12P53778 367 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 HNRNPH2P55795 449 aaKnown RBP13.58□□□□□ -0.24
COL6A1-202ENST00000463060 UFM1P61960 85 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 EIF3IQ13347 325 aaKnown RBP13.58□□□□□ -0.24
COL6A1-202ENST00000463060 PDE7AQ13946 482 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 COL9A2Q14055 689 aaPredicted RBP13.58□□□□□ -0.24
COL6A1-202ENST00000463060 UBAP2LQ14157 1087 aaKnown RBP13.58□□□□□ -0.24
COL6A1-202ENST00000463060 SQLEQ14534 574 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 SLC9A5Q14940 896 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 ZNF385CQ66K41 422 aaPredicted RBP13.58□□□□□ -0.24
COL6A1-202ENST00000463060 NIPAL1Q6NVV3 410 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 CYB5D1Q6P9G0 228 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 TTLL10Q6ZVT0 673 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 MED25Q71SY5 747 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 TREML1Q86YW5 311 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 MIER2Q8N344 545 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 NUDT8Q8WV74 236 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 SLC45A3Q96JT2 553 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 TSSK3Q96PN8 268 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 LRRC37BQ96QE4 947 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 MAPKAP1Q9BPZ7 522 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 NDC1Q9BTX1 674 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 SPRY4Q9C004 299 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 LYRM4Q9HD34 91 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 PRM3Q9NNZ6 103 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 MRGBPQ9NV56 204 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 AKAP7Q9P0M2 348 aaPredicted RBP13.58□□□□□ -0.24
COL6A1-202ENST00000463060 SRPK3Q9UPE1 567 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 ATG4BQ9Y4P1 393 aa13.58□□□□□ -0.24
COL6A1-202ENST00000463060 A0A088AWK7 358 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 GNG14A0A1W2PPG7 69 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 A0A1W2PR48 441 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 SGK494L7N484 410 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 PSMD12O00232 456 aaPredicted RBP13.57□□□□□ -0.24
COL6A1-202ENST00000463060 AGRPO00253 132 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 PLD2O14939 933 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 TBX19O60806 448 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 ITIH1P19827 911 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 ZNF10P21506 573 aaPredicted RBP13.57□□□□□ -0.24
COL6A1-202ENST00000463060 SDHBP21912 280 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 LIM2P55344 173 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 TAS2R50P59544 299 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 TARDBPQ13148 414 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL6A1-202ENST00000463060 PAOXQ6QHF9 649 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 IKBIPQ70UQ0 350 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 TMPRSS7Q7RTY8 843 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 GPR180Q86V85 440 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 FAM9CQ8IZT9 166 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 CA13Q8N1Q1 262 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 KRTCAP2Q8N6L1 136 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 OR9I1Q8NGQ6 314 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 CLHC1Q8NHS4 586 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 WDR36Q8NI36 951 aaKnown RBP13.57□□□□□ -0.24
COL6A1-202ENST00000463060 PMEPA1Q969W9 287 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 CTRCQ99895 268 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 CLMPQ9H6B4 373 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 LYARQ9NX58 379 aaKnown RBP13.57□□□□□ -0.24
COL6A1-202ENST00000463060 TEX10Q9NXF1 929 aaPredicted RBP13.57□□□□□ -0.24
COL6A1-202ENST00000463060 SLC39A1Q9NY26 324 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 ARMCX1Q9P291 453 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 DHCR7Q9UBM7 475 aaKnown RBP13.57□□□□□ -0.24
COL6A1-202ENST00000463060 ATP6V1HQ9UI12 483 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 DAPP1Q9UN19 280 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 PCDHGA3Q9Y5H0 932 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 PTPRBP23467 1997 aa13.57□□□□□ -0.24
COL6A1-202ENST00000463060 FER1L5A0AVI2 2057 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 A0A1B0GX78 115 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 ZNF860A6NHJ4 632 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 GABRR3A8MPY1 467 aa13.56□□□□□ -0.24
COL6A1-202ENST00000463060 CYR61O00622 381 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms