RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 UBE3DQ7Z6J8 389 aa21.24■□□□□ 0.99
C9orf3-209ENST00000460573 KIRREL3Q8IZU9 778 aa21.24■□□□□ 0.99
C9orf3-209ENST00000460573 RAB3IL1Q8TBN0 382 aa21.24■□□□□ 0.99
C9orf3-209ENST00000460573 NACC2Q96BF6 587 aa21.24■□□□□ 0.99
C9orf3-209ENST00000460573 OR1F2PQ96R84 312 aa21.24■□□□□ 0.99
C9orf3-209ENST00000460573 MLXIPLQ9NP71 852 aa21.24■□□□□ 0.99
C9orf3-209ENST00000460573 CTSFQ9UBX1 484 aa21.24■□□□□ 0.99
C9orf3-209ENST00000460573 PTRH2Q9Y3E5 179 aaKnown RBP21.24■□□□□ 0.99
C9orf3-209ENST00000460573 TIMM22Q9Y584 194 aa21.24■□□□□ 0.99
C9orf3-209ENST00000460573 MGAQ8IWI9 3026 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 AZIN1O14977 448 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 CHST10O43529 356 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 CNOT3O75175 753 aaKnown RBP21.23■□□□□ 0.99
C9orf3-209ENST00000460573 SCELO95171 688 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 CHEK2O96017 543 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 ATXN8OSP0DMR3 200 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 SSPNQ14714 243 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 MTERF4Q7Z6M4 381 aaKnown RBP21.23■□□□□ 0.99
C9orf3-209ENST00000460573 CLYBLQ8N0X4 340 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 MGARPQ8TDB4 240 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 ADAMTS18Q8TE60 1221 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 KCNA7Q96RP8 456 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 SPSB2Q99619 263 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 SHCBP1LQ9BZQ2 653 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 SEMA4CQ9C0C4 833 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 FARSBQ9NSD9 589 aaKnown RBP21.23■□□□□ 0.99
C9orf3-209ENST00000460573 HCN3Q9P1Z3 774 aa21.23■□□□□ 0.99
C9orf3-209ENST00000460573 MRPS18BQ9Y676 258 aaKnown RBP21.23■□□□□ 0.99
C9orf3-209ENST00000460573 ZNF860A6NHJ4 632 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 PLPP1O14494 284 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 SH3BGRLO75368 114 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 B3GALT4O96024 378 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 IGHEP01854 428 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 CHRNGP07510 517 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 CYC1P08574 325 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 SFTPCP11686 197 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 RNH1P13489 461 aaKnown RBP21.22■□□□□ 0.99
C9orf3-209ENST00000460573 HIST1H1TP22492 207 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-209ENST00000460573 ATP5A1P25705 553 aaKnown RBP21.22■□□□□ 0.99
C9orf3-209ENST00000460573 SSR2P43308 183 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 XCR1P46094 333 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 FOXA1P55317 472 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 ABCE1P61221 599 aaKnown RBP21.22■□□□□ 0.99
C9orf3-209ENST00000460573 RPS18P62269 152 aaKnown RBP21.22■□□□□ 0.99
C9orf3-209ENST00000460573 PPP2R2AP63151 447 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 MAT1AQ00266 395 aaKnown RBP21.22■□□□□ 0.99
C9orf3-209ENST00000460573 STX3Q13277 289 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 SYT16Q17RD7 645 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 HSP90B2PQ58FF3 399 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 VWA2Q5GFL6 755 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 TCHHL1Q5QJ38 904 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-209ENST00000460573 RNF165Q6ZSG1 346 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 MED25Q71SY5 747 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 ZCCHC7Q8N3Z6 543 aaKnown RBP21.22■□□□□ 0.99
C9orf3-209ENST00000460573 VPS29Q9UBQ0 182 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 ADAM29Q9UKF5 820 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 SLC12A4Q9UP95 1085 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-209ENST00000460573 TRAF6Q9Y4K3 522 aa21.22■□□□□ 0.99
C9orf3-209ENST00000460573 SMG1Q96Q15 3661 aaKnown RBP21.22■□□□□ 0.99
C9orf3-209ENST00000460573 A0A0G2JN53 185 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 SAP18O00422 153 aaKnown RBP21.21■□□□□ 0.99
C9orf3-209ENST00000460573 PCDH17O14917 1159 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 BMP10O95393 424 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 ETHE1O95571 254 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 HSPA4LO95757 839 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 PLA2G2AP14555 144 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 WT1P19544 449 aaPredicted RBP21.21■□□□□ 0.99
C9orf3-209ENST00000460573 BGNP21810 368 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 JAK1P23458 1154 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 KLC1Q07866 573 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 NFATC3Q12968 1075 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 ABRAXAS2Q15018 415 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 UGT8Q16880 541 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 KANK2Q63ZY3 851 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 ATG16L1Q676U5 607 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 PAGE2Q7Z2X7 111 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 PRICKLE2Q7Z3G6 844 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 NUDT13Q86X67 352 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 ZC3H7AQ8IWR0 971 aaKnown RBP21.21■□□□□ 0.99
C9orf3-209ENST00000460573 CA13Q8N1Q1 262 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 METTL4Q8N3J2 472 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 ACOT4Q8N9L9 421 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 OR5T3Q8NGG3 340 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 IP6K3Q96PC2 410 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 LYRM4Q9HD34 91 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 SEMA3GQ9NS98 782 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 COL6A6A6NMZ7 2263 aa21.21■□□□□ 0.99
C9orf3-209ENST00000460573 B8ZZF3 427 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 PSMD12O00232 456 aaPredicted RBP21.2■□□□□ 0.98
C9orf3-209ENST00000460573 SLC1A6P48664 564 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 RUNX2Q13950 521 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 TUBB8Q3ZCM7 444 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 SH2D4BQ5SQS7 431 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 CLEC6AQ6EIG7 209 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 ZNF793Q6ZN11 406 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 TRIM46Q7Z4K8 759 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 RAB43Q86YS6 212 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 TBC1D20Q96BZ9 403 aa21.2■□□□□ 0.98
C9orf3-209ENST00000460573 PEX11GQ96HA9 241 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms