RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 FGBP02675 491 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 BMPR1AP36894 532 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 CRISP3P54108 245 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 DNASE1L3Q13609 305 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 INAQ16352 499 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 DUSP7Q16829 419 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 TRIM16LQ309B1 348 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 WASH2PQ6VEQ5 465 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 SVOPQ8N4V2 548 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 OR8D1Q8WZ84 308 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 LZICQ8WZA0 190 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 TBC1D20Q96BZ9 403 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 ZNF300Q96RE9 604 aaPredicted RBP17.34■□□□□ 0.37
HPS3-202ENST00000460120 MACROD1Q9BQ69 325 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 SGPP1Q9BX95 441 aa17.34■□□□□ 0.37
HPS3-202ENST00000460120 CXorf51AA0A1B0GTR3 108 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 TRBC2A0A5B9 178 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 ADAMDEC1O15204 470 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 BCHEP06276 602 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 C21orf58P58505 322 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 LEXMQ3ZCV2 418 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 FAM71E1Q6IPT2 247 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 ZNF557Q8N988 423 aaPredicted RBP17.33■□□□□ 0.36
HPS3-202ENST00000460120 VANGL1Q8TAA9 524 aaPredicted RBP17.33■□□□□ 0.36
HPS3-202ENST00000460120 EXOSC8Q96B26 276 aaKnown RBP17.33■□□□□ 0.36
HPS3-202ENST00000460120 LGALS12Q96DT0 336 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 HRASLS5Q96KN8 279 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 FAM129BQ96TA1 746 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 CRISPLD2Q9H0B8 497 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 CERS4Q9HA82 394 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 C1GALT1Q9NS00 363 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 FUOMA2VDF0 154 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 EFCAB9A8MZ26 197 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 H7BY64 318 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 EFCAB14O75071 495 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 IMPDH2P12268 514 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 HOXB6P17509 224 aaKnown RBP17.33■□□□□ 0.36
HPS3-202ENST00000460120 ZNF33BQ06732 778 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 CD300CQ08708 224 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 ZNF234Q14588 700 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 ZNF658BQ4V348 819 aaPredicted RBP17.33■□□□□ 0.36
HPS3-202ENST00000460120 SYT6Q5T7P8 510 aaPredicted RBP17.33■□□□□ 0.36
HPS3-202ENST00000460120 TRIM40Q6P9F5 258 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 PRSS48Q7RTY5 328 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 CAMKMTQ7Z624 323 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.33■□□□□ 0.36
HPS3-202ENST00000460120 ZHX1-C8orf76Q96EF9 292 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 PRAP1Q96NZ9 151 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 ZNF347Q96SE7 839 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 OSGEPL1Q9H4B0 414 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 SLAMF7Q9NQ25 335 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 IMPAD1Q9NX62 359 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 MARK1Q9P0L2 795 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 DUSP12Q9UNI6 340 aa17.33■□□□□ 0.36
HPS3-202ENST00000460120 FAM32AQ9Y421 112 aaKnown RBP17.33■□□□□ 0.36
HPS3-202ENST00000460120 USP34Q70CQ2 3546 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 TBC1D3BA6NDS4 549 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 PPM1DO15297 605 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 ADH1CP00326 375 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 SRPRAP08240 638 aaKnown RBP17.32■□□□□ 0.36
HPS3-202ENST00000460120 BMP4P12644 408 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 FEN1P39748 380 aaKnown RBP17.32■□□□□ 0.36
HPS3-202ENST00000460120 DGUOKQ16854 277 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 CEACAM20Q6UY09 585 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 HEATR4Q86WZ0 1026 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 LAS2Q8IYD9 372 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 LRRC56Q8IYG6 542 aaPredicted RBP17.32■□□□□ 0.36
HPS3-202ENST00000460120 NRSN1Q8IZ57 195 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 TFGQ92734 400 aaPredicted RBP17.32■□□□□ 0.36
HPS3-202ENST00000460120 BADQ92934 168 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 POP5Q969H6 163 aaKnown RBP17.32■□□□□ 0.36
HPS3-202ENST00000460120 IL23AQ9NPF7 189 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 DEC1Q9P2X7 70 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 PCDHGB1Q9Y5G3 927 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 HELZP42694 1942 aaKnown RBP17.32■□□□□ 0.36
HPS3-202ENST00000460120 OR2A25A4D2G3 310 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 PLPP1O14494 284 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 SLC9A3R1O14745 358 aaPredicted RBP17.32■□□□□ 0.36
HPS3-202ENST00000460120 SLC22A1O15245 554 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 SULT1C4O75897 302 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 SOX14O95416 240 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 EPHX1P07099 455 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 DBTP11182 482 aaKnown RBP17.32■□□□□ 0.36
HPS3-202ENST00000460120 ZNF12P17014 697 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 TPP2P29144 1249 aaPredicted RBP17.32■□□□□ 0.36
HPS3-202ENST00000460120 HTRA4P83105 476 aaPredicted RBP17.32■□□□□ 0.36
HPS3-202ENST00000460120 IFITM3Q01628 133 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 CAMK1Q14012 370 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 ZNF846Q147U1 533 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 SPDYE7PQ495Y7 208 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 TAGAPQ8N103 731 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 METTL4Q8N3J2 472 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 AQP11Q8NBQ7 271 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 CXorf40AQ8TE69 158 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 PHF10Q8WUB8 498 aaKnown RBP17.32■□□□□ 0.36
HPS3-202ENST00000460120 GGHQ92820 318 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 LRIG1Q96JA1 1093 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 XKR8Q9H6D3 395 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 HMG20AQ9NP66 347 aa17.32■□□□□ 0.36
HPS3-202ENST00000460120 NFKBIL1Q9UBC1 381 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms