RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 DIO3P55073 304 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 RPS13P62277 151 aaKnown RBP9.85□□□□□ -0.83
USP39-210ENST00000459775 POLR2GP62487 172 aaKnown RBP eCLIP9.85□□□□□ -0.83
USP39-210ENST00000459775 NAA25Q14CX7 972 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 RFTN2Q52LD8 501 aaPredicted RBP9.85□□□□□ -0.83
USP39-210ENST00000459775 CCDC157Q569K6 752 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 LIPJQ5W064 366 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 MED27Q6P2C8 311 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 FBXO42Q6P3S6 717 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 SPESP1Q6UW49 350 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 TMIGD1Q6UXZ0 262 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 LARP4Q71RC2 724 aaKnown RBP eCLIP9.85□□□□□ -0.83
USP39-210ENST00000459775 RABEPKQ7Z6M1 372 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 CADM3Q8N126 398 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 FITM2Q8N6M3 262 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 OR4K1Q8NGD4 311 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 PRR7Q8TB68 274 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 CCT6BQ92526 530 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 USP7Q93009 1102 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 TRAPPC9Q96Q05 1148 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 NUDT22Q9BRQ3 303 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 SYNDIG1Q9H7V2 258 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 GALNT8Q9NY28 637 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 GPRC5BQ9NZH0 403 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 EHD3Q9NZN3 535 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 LOC105369274A0A096LPK9 316 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 A0A0G2JN53 185 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 LOC102723532A0A0G2JNH3 316 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 A0A0J9YVX5 310 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 C2orf74A8MZ97 194 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 PSMD9O00233 223 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 NUDT21O43809 227 aaKnown RBP9.85□□□□□ -0.83
USP39-210ENST00000459775 ICMTO60725 284 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 SNRNP200O75643 2136 aaKnown RBP9.85□□□□□ -0.83
USP39-210ENST00000459775 GOSR1O95249 250 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 C9P02748 559 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 GBAP04062 536 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 ENO1P06733 434 aaKnown RBP9.85□□□□□ -0.83
USP39-210ENST00000459775 CAPZBP47756 277 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 KCNAB1Q14722 419 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 KIR2DS3Q14952 304 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 GGTA1PQ4G0N0 100 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 XKR7Q5GH72 579 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 SPDYAQ5MJ70 313 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 FRMPD2BQ6IN97 320 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 ZNF425Q6IV72 752 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 EFL1Q7Z2Z2 1120 aaKnown RBP9.85□□□□□ -0.83
USP39-210ENST00000459775 GALNTL5Q7Z4T8 443 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 STK32CQ86UX6 486 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 OOSP2Q86WS3 158 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 OR4N4Q8N0Y3 316 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 WDR34Q96EX3 536 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 C11orf24Q96F05 449 aaPredicted RBP9.85□□□□□ -0.83
USP39-210ENST00000459775 APIPQ96GX9 242 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 SECISBP2Q96T21 854 aaKnown RBP9.85□□□□□ -0.83
USP39-210ENST00000459775 MRPL1Q9BYD6 325 aaKnown RBP9.85□□□□□ -0.83
USP39-210ENST00000459775 AICDAQ9GZX7 198 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 TWSG1Q9GZX9 223 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 PCBD2Q9H0N5 130 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 STN1Q9H668 368 aaKnown RBP9.85□□□□□ -0.83
USP39-210ENST00000459775 STARD5Q9NSY2 213 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 SLC12A4Q9UP95 1085 aa9.85□□□□□ -0.83
USP39-210ENST00000459775 USP24Q9UPU5 2620 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 IGHV5-51A0A0C4DH38 117 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 A0A1W2PQM1 296 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 TRPC5OSA6NMA1 111 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 C4orf47A7E2U8 309 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 H0YIV9 168 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 FCHO1O14526 889 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 PCDHGA12O60330 932 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 CHEK2O96017 543 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 KRT6AP02538 564 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 OPN1MWP04001 364 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 KRT6BP04259 564 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 OPN1MW2P0DN77 364 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 OPN1MW3P0DN78 364 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 DDX5P17844 614 aaKnown RBP9.84□□□□□ -0.83
USP39-210ENST00000459775 CMPK1P30085 196 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 KRT6CP48668 564 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 NOVA1P51513 510 aaKnown RBP9.84□□□□□ -0.83
USP39-210ENST00000459775 CLDN6P56747 220 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 CCL7P80098 99 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 E2F2Q14209 437 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 NR6A1Q15406 480 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 NR0B2Q15466 257 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 TBCCQ15814 346 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 MAPKAPK3Q16644 382 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 ARMC6Q6NXE6 501 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 FIGLAQ6QHK4 219 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 SPRED1Q7Z699 444 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 THNSL2Q86YJ6 484 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 DTWD1Q8N5C7 304 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 AVL9Q8NBF6 648 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 LILRB4Q8NHJ6 448 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 SLC47A1Q96FL8 570 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 AHCYL2Q96HN2 611 aaKnown RBP9.84□□□□□ -0.83
USP39-210ENST00000459775 SMAD5Q99717 465 aaKnown RBP9.84□□□□□ -0.83
USP39-210ENST00000459775 CCDC3Q9BQI4 270 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 EDEM2Q9BV94 578 aa9.84□□□□□ -0.83
USP39-210ENST00000459775 SLC29A3Q9BZD2 475 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms