RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 ZNF282Q9UDV7 671 aaPredicted RBP13.53□□□□□ -0.24
SCFD1-203ENST00000458591 CLEC2DQ9UHP7 191 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 UGT2A1Q9Y4X1 527 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 SLC5A10A0PJK1 596 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 K7ESM1 405 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 PSMD11O00231 422 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 WWP2O00308 870 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 PLK4O00444 970 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 RNASET2O00584 256 aaKnown RBP13.53□□□□□ -0.24
SCFD1-203ENST00000458591 FFAR1O14842 300 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 ADAMDEC1O15204 470 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 GRM6O15303 877 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 CCL16O15467 120 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 PTTG1O95997 202 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 PCSK2P16519 638 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 VIPR1P32241 457 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 CHI3L1P36222 383 aaPredicted RBP13.53□□□□□ -0.24
SCFD1-203ENST00000458591 ASMTP46597 345 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 SLC7A9P82251 487 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 EEF1A2Q05639 463 aaKnown RBP13.53□□□□□ -0.24
SCFD1-203ENST00000458591 MADCAM1Q13477 382 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 MPP7Q5T2T1 576 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 HENMT1Q5T8I9 393 aaKnown RBP13.53□□□□□ -0.24
SCFD1-203ENST00000458591 MED27Q6P2C8 311 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 RBM45Q8IUH3 476 aaKnown RBP13.53□□□□□ -0.24
SCFD1-203ENST00000458591 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.53□□□□□ -0.24
SCFD1-203ENST00000458591 CFAP206Q8IYR0 622 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 AMER2Q8N7J2 671 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 VANGL1Q8TAA9 524 aaPredicted RBP13.53□□□□□ -0.24
SCFD1-203ENST00000458591 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.53□□□□□ -0.242e-17■■■■□ 19.6
SCFD1-203ENST00000458591 C16orf78Q8WTQ4 265 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 ZNF558Q96NG5 402 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 ACAT2Q9BWD1 397 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 MOV10Q9HCE1 1003 aaKnown RBP13.53□□□□□ -0.24
SCFD1-203ENST00000458591 POFUT2Q9Y2G5 429 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 TRBV4-1A0A0J9YWV2 114 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 TRBC2A0A5B9 178 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 A6NL46 340 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 RTCAO00442 366 aaKnown RBP13.52□□□□□ -0.24
SCFD1-203ENST00000458591 AP3D1O14617 1153 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 KPNA5O15131 536 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 KMOO15229 486 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 ZW10O43264 779 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 CHRM5P08912 532 aaPredicted RBP13.52□□□□□ -0.24
SCFD1-203ENST00000458591 FURINP09958 794 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 CHMP24386 653 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 S100A5P33763 92 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 PIK3CBP42338 1070 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 LIM2P55344 173 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 C21orf58P58505 322 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 KRR1Q13601 381 aaKnown RBP13.52□□□□□ -0.24
SCFD1-203ENST00000458591 PUM1Q14671 1186 aaKnown RBP eCLIP13.52□□□□□ -0.24
SCFD1-203ENST00000458591 SSX1Q16384 188 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 LRIT3Q3SXY7 679 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 CELF5Q8N6W0 485 aaKnown RBP13.52□□□□□ -0.24
SCFD1-203ENST00000458591 ST13P5Q8NFI4 369 aaPredicted RBP13.52□□□□□ -0.24
SCFD1-203ENST00000458591 BTN2A2Q8WVV5 523 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 COL21A1Q96P44 957 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 SDHCQ99643 169 aaPredicted RBP13.52□□□□□ -0.24
SCFD1-203ENST00000458591 BRF2Q9HAW0 419 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 SPG21Q9NZD8 308 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 KLHL3Q9UH77 587 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 PRKAB1Q9Y478 270 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 A3GALT2U3KPV4 340 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 UNC80Q8N2C7 3258 aa13.52□□□□□ -0.24
SCFD1-203ENST00000458591 TRAV19A0A0A6YYK7 116 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 LINC00854A0A1B0GVQ3 168 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 ARHGAP33O14559 1287 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 SEMA7AO75326 666 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 GPX5O75715 221 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 GADD45GO95257 159 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 CATP04040 527 aaKnown RBP13.52□□□□□ -0.25
SCFD1-203ENST00000458591 IL3P08700 152 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 ANXA8P13928 327 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 SOX3P41225 446 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 XCR1P46094 333 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 LIMK1P53667 647 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 COL9A2Q14055 689 aaPredicted RBP13.52□□□□□ -0.25
SCFD1-203ENST00000458591 IRF3Q14653 427 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 TEAD4Q15561 434 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 TNFAIP8L2Q6P589 184 aaPredicted RBP13.52□□□□□ -0.25
SCFD1-203ENST00000458591 CCBE1Q6UXH8 406 aaPredicted RBP13.52□□□□□ -0.25
SCFD1-203ENST00000458591 CAMKMTQ7Z624 323 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 OR52N2Q8NGI0 321 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 WDR36Q8NI36 951 aaKnown RBP13.52□□□□□ -0.25
SCFD1-203ENST00000458591 ATL1Q8WXF7 558 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 UCN3Q969E3 161 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 PPCDCQ96CD2 204 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 TRMT61AQ96FX7 289 aaKnown RBP13.52□□□□□ -0.25
SCFD1-203ENST00000458591 SLX1AQ9BQ83 275 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 NXF2Q9GZY0 626 aaKnown RBP13.52□□□□□ -0.25
SCFD1-203ENST00000458591 NMNAT1Q9HAN9 279 aaPredicted RBP13.52□□□□□ -0.25
SCFD1-203ENST00000458591 ATP6V1HQ9UI12 483 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 KCNE2Q9Y6J6 123 aa13.52□□□□□ -0.25
SCFD1-203ENST00000458591 HELZP42694 1942 aaKnown RBP13.52□□□□□ -0.25
SCFD1-203ENST00000458591 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
SCFD1-203ENST00000458591 DPM1O60762 260 aa13.51□□□□□ -0.25
SCFD1-203ENST00000458591 C1orf105O95561 183 aa13.51□□□□□ -0.25
SCFD1-203ENST00000458591 ZNF24P17028 368 aa13.51□□□□□ -0.25
SCFD1-203ENST00000458591 UGT2B15P54855 530 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms