RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ZNF236Q9UL36 1845 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 PRAMEF33A0A0G2JMD5 474 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 C2orf92A0A1B0GVN3 265 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 PRAMEF10O60809 474 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 HLA-EP13747 358 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 TNNI3P19429 210 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 CXCL2P19875 107 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 CSKP41240 450 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 ATP4BP51164 291 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 RPS15P62841 145 aaKnown RBP4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 TUBA1BP68363 451 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 KCNJ10P78508 379 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 POU4F1Q01851 419 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 SMAD2Q15796 467 aaKnown RBP4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 ETFDHQ16134 617 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 RBBP7Q16576 425 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 SGO1Q5FBB7 561 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM122CQ6P4D5 195 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 Q6ZTK2 550 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 CREB3L2Q70SY1 520 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 TUBA1AQ71U36 451 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 GPSM1Q86YR5 675 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 TTC9BQ8N6N2 239 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM151AQ8WW52 585 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 NELL1Q92832 810 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 LPPQ93052 612 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 PARK7Q99497 189 aaKnown RBP4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 MNTQ99583 582 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 ARHGAP39Q9C0H5 1083 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 EXOSC3Q9NQT5 275 aaKnown RBP4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF302Q9NR11 478 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 B3GNT2Q9NY97 397 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 CFAP97Q9P2B7 532 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 DPP7Q9UHL4 492 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 LEF1Q9UJU2 399 aaPredicted RBP4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 TNFSF13BQ9Y275 285 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC22A7Q9Y694 548 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 PLXNB1O43157 2135 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 A0A0A6YYC8 382 aaPredicted RBP4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 SNTNA6NMZ2 147 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 I3L1I5 382 aaPredicted RBP4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 CBX4O00257 560 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR182O15218 404 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 SUV39H1O43463 412 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 OR2T1O43869 369 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 B4GALT2O60909 372 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 GLP2RO95838 553 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 RAF1P04049 648 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 ALPIP09923 528 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 LIMS3P0CW19 117 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 LIMS4P0CW20 117 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 KCNJ3P48549 501 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 DSTNP60981 165 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR17Q13304 367 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 ATP6AP1LQ52LC2 224 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 PLA1AQ53H76 456 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 DOK6Q6PKX4 331 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 PLEKHH3Q7Z736 793 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 VWA5B2Q8N398 1253 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM46DQ8NEK8 389 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 CD200R1Q8TD46 325 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 KIAA1191Q96A73 305 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 NRBF2Q96F24 287 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 CDKN2AIPNLQ96HQ2 116 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC2A13Q96QE2 648 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 ACPTQ9BZG2 426 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 GSX2Q9BZM3 304 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 SPNS1Q9H2V7 528 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 SLA2Q9H6Q3 261 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 EXOSC4Q9NPD3 245 aaKnown RBP4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 RGS18Q9NS28 235 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 RBFOX1Q9NWB1 397 aaKnown RBP4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 MS4A12Q9NXJ0 267 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 FLVCR2Q9UPI3 526 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 MOKQ9UQ07 419 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 SAMHD1Q9Y3Z3 626 aaKnown RBP4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 FREM1Q5H8C1 2179 aa4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 NIPBLQ6KC79 2804 aaeCLIP4.35□□□□□ -1.71
DEPDC1-202ENST00000456315 NOTCH4Q99466 2003 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ABCA7Q8IZY2 2146 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 NLRC5Q86WI3 1866 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ABCA4P78363 2273 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 A0A0U1RQF3 1178 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 A0A1W2PPE3 182 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 GSAPA4D1B5 854 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 KLHL18O94889 574 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF682O95780 498 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 APOA4P06727 396 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 ACAA1P09110 424 aaPredicted RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 HSPA7P48741 367 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 CCT3P49368 545 aaKnown RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 AKR1C2P52895 323 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 MAP3K7CLP57077 242 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 RPL38P63173 70 aaKnown RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 AKR1C1Q04828 323 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 SCAPQ12770 1279 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 DSG2Q14126 1118 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 PTGES3Q15185 160 aaKnown RBP4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 NR6A1Q15406 480 aa4.34□□□□□ -1.71
DEPDC1-202ENST00000456315 MAPKAPK3Q16644 382 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms