RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 TRIM48Q8IWZ4 208 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 GHDCQ8N2G8 530 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 LPCAT1Q8NF37 534 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 NLGN4YQ8NFZ3 816 aaPredicted RBP7.34□□□□□ -1.23
HDAC9-218ENST00000456174 OR13C4Q8NGS5 318 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 SLC13A3Q8WWT9 602 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ELMO1Q92556 727 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 RADILQ96JH8 1075 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 WDFY2Q96P53 400 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 TBCDQ9BTW9 1192 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 HTATIP2Q9BUP3 242 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ADGRE3Q9BY15 652 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 TNKS2Q9H2K2 1166 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ELOVL6Q9H5J4 265 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 MEAF6Q9HAF1 191 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 NMRAL1Q9HBL8 299 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 GSN-AS1Q9NRJ2 163 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 TDP1Q9NUW8 608 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 SCN3BQ9NY72 215 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 CCDC167Q9P0B6 97 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 MAP10Q9P2G4 905 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 VPS9D1Q9Y2B5 631 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 PCDHA9Q9Y5H5 950 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ALG5Q9Y673 324 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 PIPSLA2A3N6 862 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 OR51F1A6NGY5 319 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 DBX1A6NMT0 343 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 MPTX1A8MV57 137 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 ANKRD66B4E2M5 251 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 K7ERQ8 282 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SLC30A4O14863 429 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 MYL12BO14950 172 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 PROM1O43490 865 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SMAD6O43541 496 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SIGLEC6O43699 453 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 NPHS1O60500 1241 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 ERN1O75460 977 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 RPP40O75818 363 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 CYP7B1O75881 506 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 GLP2RO95838 553 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 FADS2O95864 444 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 S1PR4O95977 384 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 IFNA4P05014 189 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 GLAP06280 429 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SLC35E2BP0CK96 405 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 MYL12AP19105 171 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SLC6A2P23975 617 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 CD70P32970 193 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 TNFSF8P32971 234 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SOX6P35712 828 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 LIPAP38571 399 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 CLCN5P51795 746 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 RAB10P61026 200 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 NTHL1P78549 312 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 EXOSC2Q13868 293 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SMAD2Q15796 467 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 PABPC1L2AQ5JQF8 200 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 C9orf50Q5SZB4 431 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 ATXN7L2Q5T6C5 722 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 HES5Q5TA89 166 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SLC46A3Q7Z3Q1 461 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SNX20Q7Z614 316 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 LDB1Q86U70 411 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 CEP97Q8IW35 865 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 MFSD6LQ8IWD5 586 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SVOPLQ8N434 492 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SETD9Q8NE22 299 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 MDGA1Q8NFP4 955 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 STYXQ8WUJ0 223 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 TUBGCP3Q96CW5 907 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 ZC3HAV1LQ96H79 300 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 BBS4Q96RK4 519 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 RBM4BQ9BQ04 359 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 ZNF251Q9BRH9 671 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 RBM4Q9BWF3 364 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 BBS2Q9BXC9 721 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 TTYH1Q9H313 450 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 PRDM9Q9NQV7 894 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 DYRK4Q9NR20 520 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 RDH8Q9NYR8 311 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 ACTR10Q9NZ32 417 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 MARCH4Q9P2E8 410 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 PFDN2Q9UHV9 154 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 MUTYHQ9UIF7 546 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 NUP210Q8TEM1 1887 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 A0A1B0GTQ1 180 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 WASHC1A8K0Z3 465 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 M0R082 166 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 TSC22D2O75157 780 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 APOL3O95236 402 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 RPLP0P05388 317 aaKnown RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SMIM6P0DI80 62 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 HPGDP15428 266 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 EFNA1P20827 205 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-218ENST00000456174 GPC1P35052 558 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 SOX11P35716 441 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 KIR2DL3P43628 341 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 GSTM5P46439 218 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 GSK3BP49841 420 aa7.33□□□□□ -1.24
HDAC9-218ENST00000456174 TAS2R39P59534 338 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms