RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 PARP9Q8IXQ6 854 aa14.6□□□□□ -0.07
VPS8-213ENST00000453056 MREGQ8N565 214 aa14.6□□□□□ -0.07
VPS8-213ENST00000453056 OR52B6Q8NGF0 335 aa14.6□□□□□ -0.07
VPS8-213ENST00000453056 THOC3Q96J01 351 aaKnown RBP14.6□□□□□ -0.07
VPS8-213ENST00000453056 NSUN5Q96P11 429 aaKnown RBP14.6□□□□□ -0.07
VPS8-213ENST00000453056 QRFPRQ96P65 431 aa14.6□□□□□ -0.07
VPS8-213ENST00000453056 MTERF1Q99551 399 aaKnown RBP14.6□□□□□ -0.07
VPS8-213ENST00000453056 ROPN1BQ9BZX4 212 aaPredicted RBP14.6□□□□□ -0.07
VPS8-213ENST00000453056 IQCGQ9H095 443 aaKnown RBP14.6□□□□□ -0.07
VPS8-213ENST00000453056 ROPN1Q9HAT0 212 aaPredicted RBP14.6□□□□□ -0.07
VPS8-213ENST00000453056 SEMA4BQ9NPR2 832 aaPredicted RBP14.6□□□□□ -0.07
VPS8-213ENST00000453056 PRDM9Q9NQV7 894 aa14.6□□□□□ -0.07
VPS8-213ENST00000453056 RNF11Q9Y3C5 154 aa14.6□□□□□ -0.07
VPS8-213ENST00000453056 BAHCC1Q9P281 2608 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 K7EM74 188 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 MASP2O00187 686 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 CLDN4O14493 209 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 OR7A17O14581 309 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 DLX3O60479 287 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 SEC24DO94855 1032 aaPredicted RBP14.59□□□□□ -0.07
VPS8-213ENST00000453056 SUPT7LO94864 414 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 MLYCDO95822 493 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 TBX6O95947 436 aaPredicted RBP14.59□□□□□ -0.07
VPS8-213ENST00000453056 TGFB1P01137 390 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 PDGFAP04085 211 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 SBK3P0C264 359 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 KRT4P19013 534 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 PTX3P26022 381 aaPredicted RBP14.59□□□□□ -0.07
VPS8-213ENST00000453056 CRHR1P34998 444 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 TSFMP43897 325 aaKnown RBP14.59□□□□□ -0.07
VPS8-213ENST00000453056 PRKAA2P54646 552 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 ACTN3Q08043 901 aaPredicted RBP14.59□□□□□ -0.07
VPS8-213ENST00000453056 EXT1Q16394 746 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 FRG2Q64ET8 278 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 JMJD6Q6NYC1 403 aaPredicted RBP14.59□□□□□ -0.07
VPS8-213ENST00000453056 MILR1Q7Z6M3 343 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 ANKRD37Q7Z713 158 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 TMEM151AQ8N4L1 468 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 CCDC63Q8NA47 563 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 OR2W6PQ8NHA6 318 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 RDH11Q8TC12 318 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 TSLPQ969D9 159 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 RGMAQ96B86 450 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 PTCHD1Q96NR3 888 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 CDK15Q96Q40 435 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 TMEM237Q96Q45 408 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 FRG2BQ96QU4 278 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 LPAR4Q99677 370 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 MESP1Q9BRJ9 268 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 OR51B5Q9H339 312 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 ELOVL6Q9H5J4 265 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 EPS8L2Q9H6S3 715 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 ZBTB26Q9HCK0 441 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 LYRM4Q9HD34 91 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 RAB21Q9UL25 225 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 GRID1Q9ULK0 1009 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 PPT2Q9UMR5 302 aa14.59□□□□□ -0.07
VPS8-213ENST00000453056 PRRC2CQ9Y520 2896 aaKnown RBP14.59□□□□□ -0.07
VPS8-213ENST00000453056 SVILO95425 2214 aa14.58□□□□□ -0.07
VPS8-213ENST00000453056 BLACEA4D250 179 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 FOXE1O00358 373 aaPredicted RBP14.58□□□□□ -0.08
VPS8-213ENST00000453056 SH3BGRLO75368 114 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 SCELO95171 688 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 PRR35P0CG20 571 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 HIST1H1TP22492 207 aaPredicted RBP14.58□□□□□ -0.08
VPS8-213ENST00000453056 ATP5A1P25705 553 aaKnown RBP14.58□□□□□ -0.08
VPS8-213ENST00000453056 CASRP41180 1078 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 EFNA3P52797 238 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 ARFIP1P53367 373 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 OR4D2P58180 307 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 NAA20P61599 178 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 RPS13P62277 151 aaKnown RBP14.58□□□□□ -0.08
VPS8-213ENST00000453056 CLCQ05315 142 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 SFT2D3Q587I9 215 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 ZNF678Q5SXM1 525 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 DEPDC1Q5TB30 811 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 PAPD4Q6PIY7 484 aaKnown RBP14.58□□□□□ -0.08
VPS8-213ENST00000453056 ZYG11AQ6WRX3 759 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 ZNF595Q8IYB9 648 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 CYP4X1Q8N118 509 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 C4orf33Q8N1A6 199 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 ZNF382Q96SR6 550 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 SERPINI1Q99574 410 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 ZNF552Q9H707 407 aaPredicted RBP14.58□□□□□ -0.08
VPS8-213ENST00000453056 TRPS1Q9UHF7 1281 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 LGALS13Q9UHV8 139 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 DAPP1Q9UN19 280 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 SNX6Q9UNH7 406 aa14.58□□□□□ -0.08
VPS8-213ENST00000453056 CPAMD8Q8IZJ3 1885 aa14.57□□□□□ -0.08
VPS8-213ENST00000453056 OR2W5A6NFC9 320 aa14.57□□□□□ -0.08
VPS8-213ENST00000453056 SAP18O00422 153 aaKnown RBP14.57□□□□□ -0.08
VPS8-213ENST00000453056 SUV39H1O43463 412 aa14.57□□□□□ -0.08
VPS8-213ENST00000453056 DNAJB6O75190 326 aa14.57□□□□□ -0.08
VPS8-213ENST00000453056 SEMA3DO95025 777 aa14.57□□□□□ -0.08
VPS8-213ENST00000453056 PROCP04070 461 aa14.57□□□□□ -0.08
VPS8-213ENST00000453056 IMPDH1P20839 514 aa14.57□□□□□ -0.08
VPS8-213ENST00000453056 DEKP35659 375 aaKnown RBP14.57□□□□□ -0.08
VPS8-213ENST00000453056 CDH13P55290 713 aa14.57□□□□□ -0.08
VPS8-213ENST00000453056 LIM2P55344 173 aa14.57□□□□□ -0.08
VPS8-213ENST00000453056 Q0VFX4 171 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms