RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 CXorf56Q9H5V9 222 aa6.61□□□□□ -1.35
HDLBP-222ENST00000449504 HOMER3Q9NSC5 361 aa6.61□□□□□ -1.35
HDLBP-222ENST00000449504 ZNF226Q9NYT6 803 aa6.61□□□□□ -1.35
HDLBP-222ENST00000449504 MYOTQ9UBF9 498 aa6.61□□□□□ -1.35
HDLBP-222ENST00000449504 ATG4BQ9Y4P1 393 aa6.61□□□□□ -1.35
HDLBP-222ENST00000449504 WIF1Q9Y5W5 379 aa6.61□□□□□ -1.35
HDLBP-222ENST00000449504 SLC22A7Q9Y694 548 aa6.61□□□□□ -1.35
HDLBP-222ENST00000449504 DNAJC13O75165 2243 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 IGKV3D-11A0A0A0MRZ8 115 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 MYOCOSA0A1B0GUC4 107 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 MYO1CO00159 1063 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 NDUFS4O43181 175 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 AVILO75366 819 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 NDUFS3O75489 264 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 TRAPPC6AO75865 159 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 SOX30O94993 753 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 MATN4O95460 622 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 IL18BPO95998 194 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 CATP04040 527 aaKnown RBP6.6□□□□□ -1.35
HDLBP-222ENST00000449504 ZNF888P0CJ79 500 aaPredicted RBP6.6□□□□□ -1.35
HDLBP-222ENST00000449504 RBP3P10745 1247 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 ALOX12P18054 663 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 COMTP21964 271 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 CYLC1P35663 651 aaPredicted RBP6.6□□□□□ -1.35
HDLBP-222ENST00000449504 HSD17B2P37059 387 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 HNF4AP41235 474 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 GPR143P51810 404 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 HK2P52789 917 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 EIF3EP60228 445 aaKnown RBP6.6□□□□□ -1.35
HDLBP-222ENST00000449504 RAB8AP61006 207 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 SKP1P63208 163 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 OCRLQ01968 901 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 FAM27E3Q08E93 113 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 SF3B4Q15427 424 aaKnown RBP eCLIP6.6□□□□□ -1.35
HDLBP-222ENST00000449504 KLHL38Q2WGJ6 581 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 ACSBG2Q5FVE4 666 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 TSTD2Q5T7W7 516 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 NSUN5P2Q63ZY6 315 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 CDKL3Q8IVW4 592 aaPredicted RBP6.6□□□□□ -1.35
HDLBP-222ENST00000449504 RASGEF1CQ8N431 466 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 C9orf106Q8NAJ2 232 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 GOLM1Q8NBJ4 401 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 OR52K1Q8NGK4 314 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 ACTL9Q8TC94 416 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 THAP11Q96EK4 314 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 SGCZQ96LD1 299 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 ZNF778Q96MU6 729 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 PPP1R2P1Q96PQ5 205 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 MED18Q9BUE0 208 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 ZNF703Q9H7S9 590 aaPredicted RBP6.6□□□□□ -1.35
HDLBP-222ENST00000449504 LRRC40Q9H9A6 602 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 SH2D2AQ9NP31 389 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 ZFP64Q9NPA5 681 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 ACKR4Q9NPB9 350 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 FAM114A2Q9NRY5 505 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 CATSPERZQ9NTU4 200 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 ZNF701Q9NV72 531 aaPredicted RBP6.6□□□□□ -1.35
HDLBP-222ENST00000449504 MARCH4Q9P2E8 410 aaPredicted RBP6.6□□□□□ -1.35
HDLBP-222ENST00000449504 BOKQ9UMX3 212 aaPredicted RBP6.6□□□□□ -1.35
HDLBP-222ENST00000449504 ZNF148Q9UQR1 794 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 SLC6A5Q9Y345 797 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 TESMINQ9Y4I5 508 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 SCN3AQ9NY46 2000 aa6.6□□□□□ -1.35
HDLBP-222ENST00000449504 ZANQ9Y493 2812 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 MBD3L3A6NE82 208 aaPredicted RBP6.59□□□□□ -1.35
HDLBP-222ENST00000449504 CD8B2A6NJW9 211 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 APOC4-APOC2K7ER74 178 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 CD3EAPO15446 510 aaKnown RBP6.59□□□□□ -1.35
HDLBP-222ENST00000449504 OR1F1O43749 312 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 GPRIN2O60269 458 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 CEP104O60308 925 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 ZNF354AO60765 605 aaPredicted RBP6.59□□□□□ -1.35
HDLBP-222ENST00000449504 NIPSNAP2O75323 286 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 PSIP1O75475 530 aaKnown RBP6.59□□□□□ -1.35
HDLBP-222ENST00000449504 LRATO95237 230 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 METTL18O95568 372 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 ACSL3O95573 720 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 GAS8O95995 478 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 APOC2P02655 101 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 IFNA16P05015 189 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 TMEM253P0C7T8 217 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 RNH1P13489 461 aaKnown RBP6.59□□□□□ -1.35
HDLBP-222ENST00000449504 CHRM3P20309 590 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 HRH2P25021 359 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 PSMA3P25788 255 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 GDF1P27539 372 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 FMO4P31512 558 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 GRK3P35626 688 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 MC3RP41968 323 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 TTPAP49638 278 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 CRYZQ08257 329 aaKnown RBP6.59□□□□□ -1.35
HDLBP-222ENST00000449504 KCNJ11Q14654 390 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 TOMM20Q15388 145 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 PHKG1Q16816 387 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 PARP6Q2NL67 630 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 AARS2Q5JTZ9 985 aaKnown RBP6.59□□□□□ -1.35
HDLBP-222ENST00000449504 SLC22A10Q63ZE4 541 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 OPN5Q6U736 354 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 SASS6Q6UVJ0 657 aa6.59□□□□□ -1.35
HDLBP-222ENST00000449504 PLXDC2Q6UX71 529 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms