RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 STX16O14662 325 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 OR2B3O76000 313 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 CPSF4O95639 269 aaKnown RBP7.8□□□□□ -1.16
LINC00954-202ENST00000449086 PEX11BO96011 259 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 IL6P05231 212 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 CDK1P06493 297 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 TYRP14679 529 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 TNFRSF1BP20333 461 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 GJA4P35212 333 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 PTGS2P35354 604 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 STARD6P59095 220 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 FAPQ12884 760 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 CSTF3Q12996 717 aaKnown RBP7.8□□□□□ -1.16
LINC00954-202ENST00000449086 DUSP7Q16829 419 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 CDONQ4KMG0 1287 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 C10orf62Q5T681 223 aaPredicted RBP7.8□□□□□ -1.16
LINC00954-202ENST00000449086 GLCCI1Q86VQ1 547 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 TMEM25Q86YD3 366 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 CACTIN-AS1Q8N1I8 211 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 BHMTQ93088 406 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 RPRD1AQ96P16 312 aaPredicted RBP7.8□□□□□ -1.16
LINC00954-202ENST00000449086 NELL2Q99435 816 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 IER2Q9BTL4 223 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 SLC22A4Q9H015 551 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 ACOXLQ9NUZ1 547 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 MS4A12Q9NXJ0 267 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 CCDC59Q9P031 241 aaKnown RBP7.8□□□□□ -1.16
LINC00954-202ENST00000449086 PSORS1C1Q9UIG5 152 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 FBXO9Q9UK97 447 aaPredicted RBP7.8□□□□□ -1.16
LINC00954-202ENST00000449086 SNX7Q9UNH6 387 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 MRPS17Q9Y2R5 130 aaKnown RBP7.8□□□□□ -1.16
LINC00954-202ENST00000449086 CLCA3PQ9Y6N3 262 aa7.8□□□□□ -1.16
LINC00954-202ENST00000449086 NINQ8N4C6 2090 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 TICRRQ7Z2Z1 1910 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 PCP4L1A6NKN8 68 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 NPC1O15118 1278 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 ZNF780AO75290 641 aaPredicted RBP7.79□□□□□ -1.16
LINC00954-202ENST00000449086 MMP2P08253 660 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 TSPAN19P0C672 248 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 CKMT1AP12532 417 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 CTHP32929 405 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 SOX3P41225 446 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 GNPDA1P46926 289 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 MAPK12P53778 367 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 SIGLEC14Q08ET2 396 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 NFE2L1Q14494 772 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 EIF4HQ15056 248 aaKnown RBP7.79□□□□□ -1.16
LINC00954-202ENST00000449086 QPRTQ15274 297 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 USP39Q53GS9 565 aaKnown RBP7.79□□□□□ -1.16
LINC00954-202ENST00000449086 SETMARQ53H47 684 aaPredicted RBP7.79□□□□□ -1.16
LINC00954-202ENST00000449086 PYDC2Q56P42 97 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 PLET1Q6UQ28 207 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 SUSD1Q6UWL2 747 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 GLT6D1Q7Z4J2 308 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 SYNPOQ8N3V7 929 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 LRRC20Q8TCA0 184 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 EDAQ92838 391 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 DIRAS2Q96HU8 199 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 FEVQ99581 238 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 ZSCAN5AQ9BUG6 496 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 HDHD5Q9BXW7 423 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 LRTM1Q9HBL6 345 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 KCNN3Q9UGI6 736 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 TMPRSS11EQ9UL52 423 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 MED16Q9Y2X0 877 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 BRWD1Q9NSI6 2320 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 A8MUA0 341 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 B8ZZF3 427 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 NEDD8-MDP1E9PL57 170 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 I3L521 148 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 IFRD1O00458 451 aaPredicted RBP7.79□□□□□ -1.16
LINC00954-202ENST00000449086 TBL1XO60907 577 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 CCNDBP1O95273 360 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 OTCP00480 354 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 OPN1SWP03999 348 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 ATXN1LP0C7T5 689 aaKnown RBP7.79□□□□□ -1.16
LINC00954-202ENST00000449086 CYP2A6P11509 494 aaPredicted RBP7.79□□□□□ -1.16
LINC00954-202ENST00000449086 PKMP14618 531 aaKnown RBP7.79□□□□□ -1.16
LINC00954-202ENST00000449086 DRD1P21728 446 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 RPS19P39019 145 aaKnown RBP7.79□□□□□ -1.16
LINC00954-202ENST00000449086 TNFRSF4P43489 277 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 YBEYP58557 167 aaPredicted RBP7.79□□□□□ -1.16
LINC00954-202ENST00000449086 OLR1P78380 273 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 ALDH6A1Q02252 535 aaKnown RBP7.79□□□□□ -1.16
LINC00954-202ENST00000449086 EFR3AQ14156 821 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 PTPRRQ15256 657 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 CYP27C1Q4G0S4 372 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 FBXO43Q4G163 708 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 PSAPL1Q6NUJ1 521 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 KLHL17Q6TDP4 642 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 KLHDC8BQ8IXV7 354 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 TIGD4Q8IY51 512 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 PIANPQ8IYJ0 282 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 RGL4Q8IZJ4 473 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 UMODL1-AS1Q8N2C9 162 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 DNAJC22Q8N4W6 341 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 FLCNQ8NFG4 579 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 IGSF8Q969P0 613 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 TMEM203Q969S6 136 aa7.79□□□□□ -1.16
LINC00954-202ENST00000449086 PMEPA1Q969W9 287 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms