RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CDCP1Q9H5V8 836 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 YY1AP1Q9H869 796 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 POFUT2Q9Y2G5 429 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ARID1AO14497 2285 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 LTBP1Q14766 1721 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF487B1APH4 448 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 TM9SF1O15321 606 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 SCO2O43819 266 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 OLFM2O95897 454 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 CXCR1P25024 350 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 PTX3P26022 381 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 AGTR2P50052 363 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 CCZ1BP86790 482 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 CCZ1P86791 482 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 PRMT9Q6P2P2 845 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 NACC2Q96BF6 587 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 IL17FQ96PD4 163 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 LYARQ9NX58 379 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 SPHK1Q9NYA1 384 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 BTN3A3O00478 584 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 SNPHO15079 494 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 SEC24DO94855 1032 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ADRB1P08588 477 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 CD79AP11912 226 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 LHCGRP22888 699 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 NPRL3Q12980 569 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ABRAXAS2Q15018 415 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 PLGLAQ15195 96 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 HKDC1Q2TB90 917 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 NKAIN1Q4KMZ8 207 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 KDELC1Q6UW63 502 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 PIWIL4Q7Z3Z4 852 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 STX12Q86Y82 276 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 PHOSPHO1Q8TCT1 267 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF483Q8TF39 744 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC25A36Q96CQ1 311 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 EURLQ9NYK6 297 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 AURKCQ9UQB9 309 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 MGAMO43451 1857 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 K7EQS6 105 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 CDH1P12830 882 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 BMP5P22003 454 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 FPR2P25090 351 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 MTTPP55157 894 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 KIF26BQ2KJY2 2108 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 TRMT5Q32P41 509 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 TMEM154Q6P9G4 183 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 PLD3Q8IV08 490 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 FBXO25Q8TCJ0 367 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 WFDC5Q8TCV5 224 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 FAM120BQ96EK7 910 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 DHRS4Q9BTZ2 278 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ACTL8Q9H568 366 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ERVMER34-1Q9H9K5 563 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 CLEC4EQ9ULY5 219 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 LAMB2P55268 1798 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 MIA3Q5JRA6 1907 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 DDX60LQ5H9U9 1706 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 EBAG9O00559 213 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 NR2F6P10588 404 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 LIPCP11150 499 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 HSD3B2P26439 372 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 RORAP35398 523 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 CTSKP43235 329 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 XCR1P46094 333 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 POLE2P56282 527 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 MLF1P58340 268 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 PLCXD2Q0VAA5 305 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 MSS51Q4VC12 460 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 INTS11Q5TA45 600 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ANXA8L1Q5VT79 327 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC2A7Q6PXP3 512 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 Q6ZNB5 142 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 LSM14AQ8ND56 463 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 PROX1Q92786 737 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 RSPRY1Q96DX4 576 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 FKRPQ9H9S5 495 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 MLXIPLQ9NP71 852 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 RALYQ9UKM9 306 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 IFT52Q9Y366 437 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 NAALAD2Q9Y3Q0 740 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 NEUROG3Q9Y4Z2 214 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ARHGEF33A8MVX0 844 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 PRF1P14222 555 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ENDOUP21128 410 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 IGFBP6P24592 240 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ACRV1P26436 265 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 NMBRP28336 390 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ADH7P40394 386 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR1D4P47884 311 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ARFIP2P53365 341 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 SIX1Q15475 284 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 C1orf220Q5T0J3 134 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 YOD1Q5VVQ6 348 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 REXO1L1PQ8IX06 675 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR52E1Q8NGJ3 308 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 FAM162AQ96A26 154 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 SH3YL1Q96HL8 342 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 CCT8L2Q96SF2 557 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 LRRC1Q9BTT6 524 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms