RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 CATP04040 527 aaKnown RBP6.57□□□□□ -1.36
LRRC28-203ENST00000447360 CNR1P21554 472 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 RPS3P23396 243 aaKnown RBP eCLIP6.57□□□□□ -1.36
LRRC28-203ENST00000447360 ADRA1DP25100 572 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 CEACAM8P31997 349 aaPredicted RBP6.57□□□□□ -1.36
LRRC28-203ENST00000447360 CXCR5P32302 372 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 RPL22P35268 128 aaKnown RBP6.57□□□□□ -1.36
LRRC28-203ENST00000447360 MAGEA5P43359 124 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 KCNJ1P48048 391 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 MAN2A2P49641 1150 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 PRAMEP78395 509 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 CDH17Q12864 832 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 CBLBQ13191 982 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 SLC10A1Q14973 349 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 TERF2Q15554 542 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 TSTD2Q5T7W7 516 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 NIPAL1Q6NVV3 410 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 SEM1Q6ZVN7 128 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 VASH1Q7L8A9 365 aaPredicted RBP6.57□□□□□ -1.36
LRRC28-203ENST00000447360 YTHDF3Q7Z739 585 aaKnown RBP6.57□□□□□ -1.36
LRRC28-203ENST00000447360 REXO1L1PQ8IX06 675 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 MPP5Q8N3R9 675 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 FBXW8Q8N3Y1 598 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 AFAP1L2Q8N4X5 818 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 TMEM251Q8N6I4 163 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 PRELID2Q8N945 189 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 KCT2Q8NC54 265 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 B3GNT7Q8NFL0 401 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 TRIM58Q8NG06 486 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 OR5T3Q8NGG3 340 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 ZNF480Q8WV37 535 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 SMPDL3BQ92485 455 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 ZNF778Q96MU6 729 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 PTCHD1Q96NR3 888 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 DACH2Q96NX9 599 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 PKP4Q99569 1192 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 MACROD1Q9BQ69 325 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 FAM173AQ9BQD7 235 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 CNPPD1Q9BV87 410 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 LDAHQ9H6V9 325 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 GRPEL1Q9HAV7 217 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 IL1RL2Q9HB29 575 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 CATSPERZQ9NTU4 200 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 HPF1Q9NWY4 346 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 SLC2A6Q9UGQ3 507 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 FBXW2Q9UKT8 454 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 PPIEQ9UNP9 301 aaKnown RBP6.57□□□□□ -1.36
LRRC28-203ENST00000447360 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.57□□□□□ -1.36
LRRC28-203ENST00000447360 LIPGQ9Y5X9 500 aa6.57□□□□□ -1.36
LRRC28-203ENST00000447360 IGKV3D-11A0A0A0MRZ8 115 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 TRGV5A0A0B4J1U4 118 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 TRBV11-1A0A0K0K1C0 115 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 A0A1W2PPR1 153 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 TRIM64A6NGJ6 449 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 TRIM64BA6NI03 449 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 A6NJY4 79 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 ERI2A8K979 691 aaKnown RBP6.56□□□□□ -1.36
LRRC28-203ENST00000447360 CLDN4O14493 209 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 SLC16A5O15375 505 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 CD3EAPO15446 510 aaKnown RBP6.56□□□□□ -1.36
LRRC28-203ENST00000447360 CEP104O60308 925 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 GALR3O60755 368 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-203ENST00000447360 B4GALT2O60909 372 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 NDUFS3O75489 264 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 IFNB1P01574 187 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 SLC35G6P0C7Q6 338 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 TIMP3P35625 211 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 FDFT1P37268 417 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 THEMIS2Q5TEJ8 643 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 CAPN13Q6MZZ7 669 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-203ENST00000447360 HMBOX1Q6NT76 420 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 POMZP3Q6PJE2 187 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 ASPGQ86U10 573 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 LDB1Q86U70 411 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-203ENST00000447360 LRRC56Q8IYG6 542 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-203ENST00000447360 ULK2Q8IYT8 1036 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 VWA5B2Q8N398 1253 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 RASGEF1CQ8N431 466 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 FBXO15Q8NCQ5 510 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-203ENST00000447360 PPFIBP2Q8ND30 876 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 LINC01560Q8TB33 94 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 ZCCHC10Q8TBK6 192 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 SLC13A3Q8WWT9 602 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 ASB15Q8WXK1 588 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 VMP1Q96GC9 406 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 SGCZQ96LD1 299 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 CCDC138Q96M89 665 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 CCDC77Q9BR77 488 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 KCNF1Q9H3M0 494 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 CLK4Q9HAZ1 481 aaKnown RBP6.56□□□□□ -1.36
LRRC28-203ENST00000447360 RAB6BQ9NRW1 208 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 MARCH4Q9P2E8 410 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-203ENST00000447360 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.56□□□□□ -1.36
LRRC28-203ENST00000447360 MPDZO75970 2070 aa6.56□□□□□ -1.36
LRRC28-203ENST00000447360 SVEP1Q4LDE5 3571 aa6.55□□□□□ -1.36
LRRC28-203ENST00000447360 A0A0G2JMM0 328 aa6.55□□□□□ -1.36
LRRC28-203ENST00000447360 ATP6AP2A0A1C7CYW4 349 aa6.55□□□□□ -1.36
LRRC28-203ENST00000447360 A0A1W2PPB8 328 aa6.55□□□□□ -1.36
LRRC28-203ENST00000447360 A0A1W2PRS3 328 aa6.55□□□□□ -1.36
LRRC28-203ENST00000447360 TCRBV7S3A2A0A539 114 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms