RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 COLEC12Q5KU26 742 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 FRG2Q64ET8 278 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 ZNF793Q6ZN11 406 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 GPRIN3Q6ZVF9 776 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 CHSY3Q70JA7 882 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 PARP9Q8IXQ6 854 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 FDCSPQ8NFU4 85 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 RDH11Q8TC12 318 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 TCP10LQ8TDR4 215 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 CCDC126Q96EE4 140 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 WBP1Q96G27 269 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 FRG2BQ96QU4 278 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 OR1F2PQ96R84 312 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 KCNA7Q96RP8 456 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 SERINC2Q96SA4 455 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 CENPKQ9BS16 269 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 SLC25A23Q9BV35 468 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 MECRQ9BV79 373 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 TMEM109Q9BVC6 243 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 SHCBP1LQ9BZQ2 653 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 ADNPQ9H2P0 1102 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 ELOVL6Q9H5J4 265 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 PRDM7Q9NQW5 492 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 LANCL2Q9NS86 450 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 FARSBQ9NSD9 589 aaKnown RBP11.23□□□□□ -0.61
RFC4-208ENST00000447345 MKS1Q9NXB0 559 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 TRPS1Q9UHF7 1281 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 ADGRE2Q9UHX3 823 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 MID2Q9UJV3 735 aa11.23□□□□□ -0.61
RFC4-208ENST00000447345 PLPP1O14494 284 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 C1QL1O75973 258 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 SEC24DO94855 1032 aaPredicted RBP11.22□□□□□ -0.61
RFC4-208ENST00000447345 HPP00738 406 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 PDYNP01213 254 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 PDGFAP04085 211 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 CELA2AP08217 269 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 HIST1H1TP22492 207 aaPredicted RBP11.22□□□□□ -0.61
RFC4-208ENST00000447345 ATP5A1P25705 553 aaKnown RBP11.22□□□□□ -0.61
RFC4-208ENST00000447345 HMOX2P30519 316 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 PGDP52209 483 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 HNRNPFP52597 415 aaKnown RBP11.22□□□□□ -0.61
RFC4-208ENST00000447345 NAGLUP54802 743 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 LIM2P55344 173 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 RAB38P57729 211 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 BTG2P78543 158 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 RHAGQ02094 409 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 LCP2Q13094 533 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 NSDHLQ15738 373 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 AP5B1Q2VPB7 878 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 LACTB2Q53H82 288 aaPredicted RBP11.22□□□□□ -0.61
RFC4-208ENST00000447345 BEND6Q5SZJ8 279 aaPredicted RBP11.22□□□□□ -0.61
RFC4-208ENST00000447345 DEPDC1Q5TB30 811 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 CROCCQ5TZA2 2017 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 ANKRD37Q7Z713 158 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 CLNKQ7Z7G1 428 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 PTRH1Q86Y79 214 aaKnown RBP11.22□□□□□ -0.61
RFC4-208ENST00000447345 C10orf107Q8IVU9 208 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 IQCKQ8N0W5 287 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 GALNT16Q8N428 558 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 EFCAB3Q8N7B9 438 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 ACOT4Q8N9L9 421 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 TMEM52Q8NDY8 209 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 SELENOMQ8WWX9 145 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 RGMAQ96B86 450 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 VPS50Q96JG6 964 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 PTCHD1Q96NR3 888 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 ZNF382Q96SR6 550 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 TBCDQ9BTW9 1192 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 NUDT9Q9BW91 350 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 SLC25A18Q9H1K4 315 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 MID1IP1Q9NPA3 183 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 ATP13A2Q9NQ11 1180 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 OXSMQ9NWU1 459 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 GPR83Q9NYM4 423 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 ZNF225Q9UK10 706 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 FBXW2Q9UKT8 454 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 G3BP2Q9UN86 482 aaKnown RBP11.22□□□□□ -0.61
RFC4-208ENST00000447345 PLLPQ9Y342 182 aa11.22□□□□□ -0.61
RFC4-208ENST00000447345 SPTA1P02549 2419 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 IGHV1-45A0A0A0MS14 117 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 UBFD1O14562 309 aaKnown RBP11.21□□□□□ -0.61
RFC4-208ENST00000447345 PRMT3O60678 531 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 CRCPO75575 148 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 MLYCDO95822 493 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 GBAP04062 536 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 UQCRHP07919 91 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 IL10P22301 178 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 PTX3P26022 381 aaPredicted RBP11.21□□□□□ -0.61
RFC4-208ENST00000447345 HTR6P50406 440 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 Q0VFX4 171 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 AIMP2Q13155 320 aaKnown RBP11.21□□□□□ -0.61
RFC4-208ENST00000447345 SLC13A2Q13183 592 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 PCOLCEQ15113 449 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 SFT2D3Q587I9 215 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 IRAK1BP1Q5VVH5 260 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 LIPMQ5VYY2 423 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 OR4C11Q6IEV9 310 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 TMEM205Q6UW68 189 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 FRMD7Q6ZUT3 714 aa11.21□□□□□ -0.61
RFC4-208ENST00000447345 NDUFAF7Q7L592 441 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms