RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 CD300LDQ6UXZ3 194 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 RNF44Q7L0R7 432 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 PCGF5Q86SE9 256 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 LUZP2Q86TE4 346 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 STK32CQ86UX6 486 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 SLC26A11Q86WA9 606 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 CCDC103Q8IW40 242 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.98□□□□□ -1.93
PMS1-215ENST00000447232 LINC01555Q8NAE3 123 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 MSANTD4Q8NCY6 345 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 OR5AR1Q8NGP9 310 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 MAML1Q92585 1016 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 MRPL24Q96A35 216 aaKnown RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 MMABQ96EY8 250 aaPredicted RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 SPATA13Q96N96 652 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 LPAR4Q99677 370 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 RBM4Q9BWF3 364 aaKnown RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 SFXN3Q9BWM7 321 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 UGT1A7Q9HAW7 530 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 UGT1A10Q9HAW8 530 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 BARX1Q9HBU1 254 aaPredicted RBP2.98□□□□□ -1.93
PMS1-215ENST00000447232 MED29Q9NX70 200 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 INTUQ9ULD6 942 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 LIPT1Q9Y234 373 aa2.98□□□□□ -1.93
PMS1-215ENST00000447232 DNAH1Q9P2D7 4330 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 ATP6AP2A0A1C7CYW4 349 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 OR2W5A6NFC9 320 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 TARM1B6A8C7 271 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 FOXN3O00409 490 aaPredicted RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 KPNA5O15131 536 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 KLF4O43474 513 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 NRP2O60462 931 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 ATP6AP2O75787 350 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 SLC4A1P02730 911 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 PCK1P35558 622 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 HMGCLP35914 325 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 CPA2P48052 419 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 PRLHRP49683 370 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 DSCR9P59020 149 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 MPP1Q00013 466 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 MAT1AQ00266 395 aaKnown RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 ITKQ08881 620 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 FAM27E3Q08E93 113 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 PDK1Q15118 436 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 P3H1Q32P28 736 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 SUSD1Q6UWL2 747 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 DEF8Q6ZN54 512 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 DET1Q7L5Y6 550 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 PEG10Q86TG7 708 aaKnown RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 FAM71AQ8IYT1 594 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 ATPAF2Q8N5M1 289 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 NEIL3Q8TAT5 605 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 NSMCE1Q8WV22 266 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 ZUFSPQ96AP4 578 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 CABS1Q96KC9 395 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 SCYL1Q96KG9 808 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 CSPG4P5Q96PW8 444 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 MED18Q9BUE0 208 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 ADGRE3Q9BY15 652 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 KRTAP3-1Q9BYR8 98 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 LDAHQ9H6V9 325 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 SYNPO2LQ9H987 977 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 PCDH18Q9HCL0 1135 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 BPIFA1Q9NP55 256 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 ETNK2Q9NVF9 386 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 INTS7Q9NVH2 962 aaKnown RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 KCMF1Q9P0J7 381 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 AMACRQ9UHK6 382 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 TMEFF2Q9UIK5 374 aaPredicted RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 SCINQ9Y6U3 715 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 FAM169AQ9Y6X4 670 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 TCRBV5S1A1TA0A578 114 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 PIN1P1O15428 100 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 DAPK3O43293 454 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 SSX4O60224 188 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 ANXA5P08758 320 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 PNMA6AP0CW24 399 aaPredicted RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 KRT3P12035 628 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 MSH3P20585 1137 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 FPR2P25090 351 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 ACADLP28330 430 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 PKLRP30613 574 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 HILS1P60008 231 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 COL10A1Q03692 680 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 LRRC63Q05C16 580 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 CRYZQ08257 329 aaKnown RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 PTP4A2Q12974 167 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 RPA4Q13156 261 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 PTK6Q13882 451 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 MAN2A1Q16706 1144 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 MINDY4Q4G0A6 757 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 COBLL1Q53SF7 1204 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 BEX5Q5H9J7 111 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 NAA35Q5VZE5 725 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 KCTD11Q693B1 232 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 PLXDC2Q6UX71 529 aa2.97□□□□□ -1.93
PMS1-215ENST00000447232 CYP4V2Q6ZWL3 525 aaPredicted RBP2.97□□□□□ -1.93
PMS1-215ENST00000447232 TBC1D21Q8IYX1 336 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms