RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SLC46A3Q7Z3Q1 461 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 MON1AQ86VX9 555 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 ARL5BQ96KC2 179 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 INPP5KQ9BT40 448 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 MFFQ9GZY8 342 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 MYOZ2Q9NPC6 264 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 RUVBL1Q9Y265 456 aaKnown RBP7.6□□□□□ -1.19
SMG1-202ENST00000446231 GRK1Q15835 563 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 BRAT1Q6PJG6 821 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 LRRC70Q7Z2Q7 622 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 OR6M1Q8NGM8 313 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 ESAMQ96AP7 390 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.6□□□□□ -1.194e-6■□□□□ 8.5
SMG1-202ENST00000446231 NDRG2Q9UN36 371 aaKnown RBP7.6□□□□□ -1.19
SMG1-202ENST00000446231 ALPPP05187 535 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 TGM1P22735 817 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 CAPZA1P52907 286 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 ERVK-21P61565 698 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 SLC10A6Q3KNW5 377 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 C1orf189Q5VU69 101 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 RETREG1Q9H6L5 497 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 C12orf10Q9HB07 376 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 TMEM27Q9HBJ8 222 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 PRDM5Q9NQX1 630 aaPredicted RBP7.6□□□□□ -1.19
SMG1-202ENST00000446231 CYTH4Q9UIA0 394 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 PCDHB9Q9Y5E1 797 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 C1orf167Q5SNV9 1468 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 UNC119BA6NIH7 251 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 NARSO43776 548 aaKnown RBP7.6□□□□□ -1.19
SMG1-202ENST00000446231 IFNA10P01566 189 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 IFNA4P05014 189 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 MAGEA3P43357 314 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 ATXN7L3Q14CW9 347 aaPredicted RBP7.6□□□□□ -1.19
SMG1-202ENST00000446231 FRRS1Q6ZNA5 592 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 ZFP41Q8N8Y5 198 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 CHST4Q8NCG5 386 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 RBFOX1Q9NWB1 397 aaKnown RBP7.6□□□□□ -1.19
SMG1-202ENST00000446231 ABCD2Q9UBJ2 740 aa7.6□□□□□ -1.19
SMG1-202ENST00000446231 CHIT1Q13231 466 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 ISL2Q96A47 359 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 UHRF1Q96T88 793 aaPredicted RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 TMEM43Q9BTV4 400 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 APOC1P02654 83 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 LGALS2P05162 132 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 SLURP2P0DP57 97 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 HOXD8P13378 290 aaPredicted RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 DNASE1L1P49184 302 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 GANABQ14697 944 aaKnown RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 CRB2Q5IJ48 1285 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 B3GNT7Q8NFL0 401 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 PIK3C2BO00750 1634 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 FPGSQ05932 587 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 FGL1Q08830 312 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 PRPF38BQ5VTL8 546 aaKnown RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 NOXRED1Q6NXP6 359 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 CPNE2Q96FN4 548 aaPredicted RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 OR6C2Q9NZP2 312 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 RPIAP49247 311 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 DEFA6Q01524 100 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 SMN1Q16637 294 aaKnown RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 CNTNAP1P78357 1384 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 CREBL2O60519 120 aaPredicted RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 S100PP25815 95 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 AVPR1BP47901 424 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 EN1Q05925 392 aaPredicted RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 INCA1Q0VD86 236 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 HFE2Q6ZVN8 426 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 DENND1CQ8IV53 801 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 GAL3ST3Q96A11 431 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 CNOT2Q9NZN8 540 aaKnown RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 CPSF4LA6NMK7 179 aaKnown RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 J3QLW9 94 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 NIPSNAP2O75323 286 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 SOX14O95416 240 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 S1PR4O95977 384 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 IL1AP01583 271 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 ZNF19P17023 458 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 FLI1Q01543 452 aaPredicted RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 DPY19L1Q2PZI1 675 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 RETSATQ6NUM9 610 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 PGBD3Q8N328 593 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 SMIM10L2AP0DMW4 78 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 SMIM10L2BP0DMW5 78 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 CRISP1P54107 249 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 RRAS2P62070 204 aaPredicted RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 PAN2Q504Q3 1202 aaKnown RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 SOWAHCQ53LP3 525 aaPredicted RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 TMED4Q7Z7H5 227 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 MCCC1Q96RQ3 725 aaPredicted RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 TCF7L1Q9HCS4 588 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 ASF1BQ9NVP2 202 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 ZNF169Q14929 603 aaPredicted RBP7.59□□□□□ -1.19
SMG1-202ENST00000446231 AVPI1Q5T686 147 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 QSOX2Q6ZRP7 698 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 DCUN1D3Q8IWE4 304 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 WDSUB1Q8N9V3 476 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 KXD1Q9BQD3 176 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 CIPCQ9C0C6 399 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 HLA-DQA2P01906 255 aa7.59□□□□□ -1.19
SMG1-202ENST00000446231 IL3P08700 152 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms