RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 C11orf65Q8NCR3 313 aa16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 CCL4L1Q8NHW4 92 aa16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 COQ8BQ96D53 544 aa16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 NPLQ9BXD5 320 aaPredicted RBP16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 CXorf21Q9HAI6 301 aa16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 TRPV4Q9HBA0 871 aa16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 FGF22Q9HCT0 170 aa16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 SLAMF7Q9NQ25 335 aa16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 SIRT5Q9NXA8 310 aa16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 C3orf18Q9UK00 162 aa16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 RPS6KA6Q9UK32 745 aa16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 PADI4Q9UM07 663 aa16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 AP3M1Q9Y2T2 418 aa16.06■□□□□ 0.16
LAPTM4B-201ENST00000445593 TRIOBPQ9H2D6 2365 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 SERTM1A2A2V5 107 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 KIR2DL1P43626 348 aaPredicted RBP16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 ALDH3B2P48448 385 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 DAPP51397 102 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 ARHGDIAP52565 204 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 PHEXP78562 749 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 CCDC80Q76M96 950 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 SYNPOQ8N3V7 929 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 REEP1Q9H902 201 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 ATAD3AQ9NVI7 634 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 THUMPD1Q9NXG2 353 aaKnown RBP16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 ZNF282Q9UDV7 671 aaPredicted RBP16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 FOXE1O00358 373 aaPredicted RBP16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 BCKDKO14874 412 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 NARSO43776 548 aaKnown RBP16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 PTX3P26022 381 aaPredicted RBP16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 CCR8P51685 355 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 LSAMPQ13449 338 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 SCARB2Q14108 478 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 SMN1Q16637 294 aaKnown RBP16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 SPDYE7PQ495Y7 208 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 KHDRBS2Q5VWX1 349 aaKnown RBP16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 FAM71E1Q6IPT2 247 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 SVOPLQ8N434 492 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 TP53I13Q8NBR0 393 aaPredicted RBP16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 STARD8Q92502 1023 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 CXorf36Q9H7Y0 433 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 SCHIP1Q9P0W5 487 aaPredicted RBP16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 BTNL2Q9UIR0 455 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 SCN2AQ99250 2005 aa16.05■□□□□ 0.16
LAPTM4B-201ENST00000445593 GCM2O75603 506 aaPredicted RBP16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 MANFP55145 182 aaKnown RBP16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 TP53BP2Q13625 1128 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 TTC23Q5W5X9 447 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 GALNT18Q6P9A2 607 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 LCTLQ6UWM7 567 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 SMPDL3AQ92484 453 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 TSACCQ96A04 125 aaPredicted RBP16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 DTNBP1Q96EV8 351 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 PDXPQ96GD0 296 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 OBP2AQ9NY56 170 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 SPHK1Q9NYA1 384 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 CLEC1BQ9P126 229 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 RBMX2Q9Y388 322 aaKnown RBP16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 A0A1W2PPV9 198 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 RNASET2O00584 256 aaKnown RBP16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 TMPRSS11DO60235 418 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 ADAM23O75077 832 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 TRMUO75648 421 aaKnown RBP16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 EML2O95834 649 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 ADH1BP00325 375 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 CEACAM5P06731 702 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 PRKAG1P54619 331 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 MSANTD1Q6ZTZ1 278 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 CBLL1Q75N03 491 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 EIF3MQ7L2H7 374 aaKnown RBP16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 IL17RCQ8NAC3 791 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 MRPL38Q96DV4 380 aaKnown RBP16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 KLHL31Q9H511 634 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 TMEM184CQ9NVA4 438 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 ADPRHL2Q9NX46 363 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 TAS2R9Q9NYW1 312 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 WARS2Q9UGM6 360 aaKnown RBP16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 COL4A3Q01955 1670 aa16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 MUC22E2RYF6 1773 aaPredicted RBP16.04■□□□□ 0.16
LAPTM4B-201ENST00000445593 H0YAE9 185 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 ERAL1O75616 437 aaKnown RBP16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 C8orf89P0DMQ9 161 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 ADPRHP54922 357 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 RAB8AP61006 207 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 ZNF750Q32MQ0 723 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 GCNT6Q5T4J0 391 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 GPR153Q6NV75 609 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 ERICH5Q6P6B1 374 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 SIX5Q8N196 739 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 CHDHQ8NE62 594 aaPredicted RBP16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.03■□□□□ 0.165e-8■■■■■ 28.7
LAPTM4B-201ENST00000445593 SLC35B4Q969S0 331 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 CAMK1GQ96NX5 476 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 YIPF4Q9BSR8 244 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 TEX101Q9BY14 249 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 BHLHE41Q9C0J9 482 aaPredicted RBP16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 EPB41L1Q9H4G0 881 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 MAGIXQ9H6Y5 334 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 PTTG2Q9NZH5 202 aa16.03■□□□□ 0.16
LAPTM4B-201ENST00000445593 DOLKQ9UPQ8 538 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms