RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TM9SF3Q9HD45 589 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 CLEC1BQ9P126 229 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 ARHGEF15O94989 841 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 BCKDHAP12694 445 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 OLR1P78380 273 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 C14orf28Q4W4Y0 310 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 LRRC69Q6ZNQ3 347 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 OR2L8Q8NGY9 312 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 TXLNGYQ9BZA5 131 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 LRMDAQ9H2I8 198 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 ADAMTS6Q9UKP5 1117 aa13.51□□□□□ -0.25
SMARCA4-204ENST00000444061 TP53I11O14683 189 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 FABP3P05413 133 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 ERVPABLB-1P60509 514 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 PRDX1Q06830 199 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 PTGR1Q14914 329 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 SGCBQ16585 318 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 SLC2A7Q6PXP3 512 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 RNF111Q6ZNA4 994 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 OR5P2Q8WZ92 322 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 RSPRY1Q96DX4 576 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 WBP11Q9Y2W2 641 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 U3KQV3 271 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 SMNDC1O75940 238 aaKnown RBP eCLIP13.5□□□□□ -0.251e-8■□□□□ 10.1
SMARCA4-204ENST00000444061 ITGA3P26006 1051 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 TMEM184AQ6ZMB5 413 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 LRRC25Q8N386 305 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 ELF4Q99607 663 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 MYRFQ9Y2G1 1151 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 A0A1W2PP18 115 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 MYL12AP19105 171 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 ZNF33BQ06732 778 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 MPP2Q14168 576 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 TTC23Q5W5X9 447 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 TYW3Q6IPR3 259 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 RAB43Q86YS6 212 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 ETFBKMTQ8IXQ9 262 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 LKAAEAR1Q8TD35 194 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 MOAP1Q96BY2 351 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 LRRC58Q96CX6 371 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 SMAD5Q99717 465 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 SMOXQ9NWM0 555 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 CHN2P52757 468 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 MCCD1P59942 119 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 E2F1Q01094 437 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 DCST1Q5T197 706 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 PIGWQ7Z7B1 504 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 FAM98AQ8NCA5 519 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 OR5L2Q8NGL0 311 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 ZUFSPQ96AP4 578 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 COQ10AQ96MF6 247 aa13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 PITHD1Q9GZP4 211 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-204ENST00000444061 A0A087WXM4 84 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 A0A0A6YYC8 382 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 TRBC2A0A5B9 178 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 I3L1I5 382 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 AREL1O15033 823 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 IFNGP01579 166 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 PORP16435 677 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 MAGEA3P43357 314 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 RPL5P46777 297 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 SH3BP2P78314 561 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 CDKL1Q00532 357 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 GPR18Q14330 331 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 FBXL6Q8N531 539 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 THAP3Q8WTV1 239 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 MKL2Q9ULH7 1088 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 MYOCOSA0A1B0GUC4 107 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 SDHDO14521 159 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 BCHEP06276 602 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 FOLR3P41439 243 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 CDK6Q00534 326 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 PYCR3Q53H96 274 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 SERINC2Q96SA4 455 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 TMEM9BQ9NQ34 198 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 NUP205Q92621 2012 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 EFCAB7A8K855 629 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 PEX1O43933 1283 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 MOSPD3O75425 235 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 TRAPPC6AO75865 159 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 MATN1P21941 496 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 PSMB5P28074 263 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 EMP2P54851 167 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 LGALS3BPQ08380 585 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 NRF1Q16656 503 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 MTX3Q5HYI7 312 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 AAGABQ6PD74 315 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 COMMD6Q7Z4G1 85 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 OR4N5Q8IXE1 308 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 SLC37A2Q8TED4 501 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 PRRX2Q99811 253 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 WDR45Q9Y484 360 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 PLEKHM1Q9Y4G2 1056 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 ENTPD5O75356 428 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 HTR6P50406 440 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 PHOSPHO1Q8TCT1 267 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 TCTN2Q96GX1 697 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 CDC6Q99741 560 aa13.49□□□□□ -0.25
SMARCA4-204ENST00000444061 EDEM2Q9BV94 578 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms