RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 KCNC2Q96PR1 638 aa17.67■□□□□ 0.42
ATPAF2-201ENST00000444058 MRPS33Q9Y291 106 aaKnown RBP17.67■□□□□ 0.42
ATPAF2-201ENST00000444058 SCN2AQ99250 2005 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 A0A087WUV0 522 aaPredicted RBP17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 ANKUB1A6NFN9 424 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 UGDHO60701 494 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 ABHD2P08910 425 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 RBP1P09455 135 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 COL6A2P12110 1019 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 GFAPP14136 432 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 MAOAP21397 527 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 MSH2P43246 934 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 PIK3CGP48736 1102 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 PLA2G16P53816 162 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 RAB38P57729 211 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 TAS2R50P59544 299 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 MRPL49Q13405 166 aaKnown RBP17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 MEP1AQ16819 746 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 PFKFB4Q16877 469 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 ADNP2Q6IQ32 1131 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 GRHL2Q6ISB3 625 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 SCUBE1Q8IWY4 988 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 ZNF595Q8IYB9 648 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 CNPY4Q8N129 248 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 ST6GALNAC3Q8NDV1 305 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 OR7G3Q8NG95 312 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 TBCDQ9BTW9 1192 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 MS4A8Q9BY19 250 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 VPS11Q9H270 941 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 PRDM7Q9NQW5 492 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 ABI3Q9P2A4 366 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 TMCO1Q9UM00 188 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 DAPP1Q9UN19 280 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 PCDHGB6Q9Y5F9 930 aa17.66■□□□□ 0.42
ATPAF2-201ENST00000444058 CPAMD8Q8IZJ3 1885 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 SAGE2PA6NJ88 616 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 FAM227AF5H4B4 570 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 EDN3P14138 238 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 PIK3CBP42338 1070 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 ARFIP1P53367 373 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 ELOAQ14241 798 aaKnown RBP17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 TSNAXIP1Q2TAA8 658 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 EIF2S3LQ2VIR3 472 aaKnown RBP17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 LIPJQ5W064 366 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 FAM180AQ6UWF9 173 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 CHSY3Q70JA7 882 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 TRMT10CQ7L0Y3 403 aaKnown RBP17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 TEX9Q8N6V9 391 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 BCORP1Q8N888 145 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 C7orf57Q8NEG2 295 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 SUN3Q8TAQ9 357 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 F2RL3Q96RI0 385 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 SLX1AQ9BQ83 275 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 COPS7BQ9H9Q2 264 aaPredicted RBP17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 LYRM4Q9HD34 91 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 NECTIN3Q9NQS3 549 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 NFU1Q9UMS0 254 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 PPIEQ9UNP9 301 aaKnown RBP17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 ANGPTL3Q9Y5C1 460 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 DOPEY2Q9Y3R5 2298 aa17.65■□□□□ 0.42
ATPAF2-201ENST00000444058 POLEQ07864 2286 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 A0A0G2JN53 185 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 CYR61O00622 381 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 PRAMEF2O60811 474 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 AGFG2O95081 481 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 SCELO95171 688 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 LIM2P55344 173 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 TECRLQ5HYJ1 363 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 LGSNQ5TDP6 509 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 CRLF3Q8IUI8 442 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 BEST3Q8N1M1 668 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 PLD6Q8N2A8 252 aaKnown RBP17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 ARMC10Q8N2F6 343 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 AMER2Q8N7J2 671 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 NFAM1Q8NET5 270 aaPredicted RBP17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 DCAKDQ8WVC6 231 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 CMTM7Q96FZ5 175 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 PSMG3-AS1Q96PY0 264 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 PRTFDC1Q9NRG1 225 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 PCDHGA11Q9Y5H2 935 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 CLDN16Q9Y5I7 305 aa17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 USP9YO00507 2555 aaPredicted RBP17.64■□□□□ 0.41
ATPAF2-201ENST00000444058 BLACEA4D250 179 aa17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 H0YIV9 168 aa17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 CERS1P27544 350 aa17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 KHDRBS2Q5VWX1 349 aaKnown RBP17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 ZNF324BQ6AW86 544 aaPredicted RBP17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 UBE3DQ7Z6J8 389 aa17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 RPS19BP1Q86WX3 136 aaKnown RBP17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 CYP4X1Q8N118 509 aa17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 PRR7Q8TB68 274 aa17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 REPS1Q96D71 796 aa17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 NPAS2Q99743 824 aa17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 ACTR8Q9H981 624 aa17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 OLAHQ9NV23 265 aa17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 PSD3Q9NYI0 1048 aa17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 KCMF1Q9P0J7 381 aa17.63■□□□□ 0.41
ATPAF2-201ENST00000444058 EXOC1LA0A1B0GW35 172 aa17.62■□□□□ 0.41
ATPAF2-201ENST00000444058 POC1B-GALNT4F8VUJ3 575 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms