RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 UBTD2Q8WUN7 234 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 F2RL3Q96RI0 385 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 TAAR6Q96RI8 345 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 SERINC2Q96SA4 455 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 FMO2Q99518 471 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 VPS11Q9H270 941 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 CDCP1Q9H5V8 836 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 ACSS3Q9H6R3 686 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 PRTFDC1Q9NRG1 225 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 PNO1Q9NRX1 252 aaKnown RBP18.82■□□□□ 0.6
LRCH3-208ENST00000443727 DMGDHQ9UI17 866 aaKnown RBP18.82■□□□□ 0.6
LRCH3-208ENST00000443727 SCN2AQ99250 2005 aa18.82■□□□□ 0.6
LRCH3-208ENST00000443727 HIVEP3Q5T1R4 2406 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 UTP20O75691 2785 aaKnown RBP18.81■□□□□ 0.6
LRCH3-208ENST00000443727 IGKV3D-11A0A0A0MRZ8 115 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 SAGE2PA6NJ88 616 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 GABRR3A8MPY1 467 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 KIF2AO00139 706 aaPredicted RBP18.81■□□□□ 0.6
LRCH3-208ENST00000443727 TUBB4AP04350 444 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 INHBAP08476 426 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 EPORP19235 508 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 CERS1P27544 350 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 ST13P50502 369 aaKnown RBP18.81■□□□□ 0.6
LRCH3-208ENST00000443727 ACAP2Q15057 778 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 OR1C1Q15619 314 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 PFKFB4Q16877 469 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 ADPRMQ3LIE5 342 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 GLE1Q53GS7 698 aaKnown RBP18.81■□□□□ 0.6
LRCH3-208ENST00000443727 MED27Q6P2C8 311 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 ABHD17CQ6PCB6 329 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 RPS19BP1Q86WX3 136 aaKnown RBP18.81■□□□□ 0.6
LRCH3-208ENST00000443727 KIF2BQ8N4N8 673 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 TEX9Q8N6V9 391 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 HORMAD2Q8N7B1 307 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 FAM47BQ8NA70 645 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 SRFBP1Q8NEF9 429 aaKnown RBP18.81■□□□□ 0.6
LRCH3-208ENST00000443727 RHEBL1Q8TAI7 183 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 ELP5Q8TE02 316 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 NR4A3Q92570 626 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 QRFPRQ96P65 431 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 KCNC2Q96PR1 638 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 ROGDIQ9GZN7 287 aa18.81■□□□□ 0.6
LRCH3-208ENST00000443727 CDC42EP4Q9H3Q1 356 aaKnown RBP18.81■□□□□ 0.6
LRCH3-208ENST00000443727 PLEKHB1Q9UF11 243 aaPredicted RBP18.81■□□□□ 0.6
LRCH3-208ENST00000443727 CCDC189A1A4V9 331 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 A1L4Q6 167 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 HMX2A2RU54 273 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 CYSRT1A8MQ03 144 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 MAN1A2O60476 641 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 MYO1DO94832 1006 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 KLHL2O95198 593 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 RNF224P0DH78 156 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 CD46P15529 392 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 CD96P40200 585 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 CASP2P42575 452 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 HSD17B7P56937 341 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 CHSY3Q70JA7 882 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 TAOK1Q7L7X3 1001 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 RELL1Q8IUW5 271 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 LGI4Q8N135 537 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 DNAJB8Q8NHS0 232 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 NPAS2Q99743 824 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 DEFB126Q9BYW3 111 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 KLHL1Q9NR64 748 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 CPAMD8Q8IZJ3 1885 aa18.8■□□□□ 0.6
LRCH3-208ENST00000443727 MAST4O15021 2626 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 SH3BGRLO75368 114 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 TBX6O95947 436 aaPredicted RBP18.79■□□□□ 0.6
LRCH3-208ENST00000443727 SERPINB1P30740 379 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 LIM2P55344 173 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 DDX39BQ13838 428 aaKnown RBP18.79■□□□□ 0.6
LRCH3-208ENST00000443727 TMEM35AQ53FP2 167 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 UBAP2Q5T6F2 1119 aaKnown RBP18.79■□□□□ 0.6
LRCH3-208ENST00000443727 SPINK14Q6IE38 97 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 GFRALQ6UXV0 394 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 CLNKQ7Z7G1 428 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 ZNF595Q8IYB9 648 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 SIGLEC12Q96PQ1 595 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 TBCDQ9BTW9 1192 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 ACTR8Q9H981 624 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 CPSF2Q9P2I0 782 aaKnown RBP18.79■□□□□ 0.6
LRCH3-208ENST00000443727 SPACA6W5XKT8 324 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 SVILO95425 2214 aa18.79■□□□□ 0.6
LRCH3-208ENST00000443727 POLEQ07864 2286 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 TRBV11-1A0A0K0K1C0 115 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 LRRTM2O43300 516 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 LDLRP01130 860 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 TGFB1P01137 390 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 ALDOAP04075 364 aaKnown RBP18.78■□□□□ 0.6
LRCH3-208ENST00000443727 IFNA16P05015 189 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 MTHFD2P13995 350 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 EEF1DP29692 281 aaKnown RBP18.78■□□□□ 0.6
LRCH3-208ENST00000443727 ALDH18A1P54886 795 aaKnown RBP18.78■□□□□ 0.6
LRCH3-208ENST00000443727 PER3P56645 1201 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 KCNK10P57789 538 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 PMP22Q01453 160 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 SETDB1Q15047 1291 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 AP5B1Q2VPB7 878 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 C4orf17Q53FE4 359 aa18.78■□□□□ 0.6
LRCH3-208ENST00000443727 ZNF324BQ6AW86 544 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms