RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 TCRBV3S1A0A5B6 114 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 POM121BA6NF01 834 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 THEGLP0DJG4 465 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 DBTP11182 482 aaKnown RBP10.13□□□□□ -0.79
CALD1-210ENST00000443197 PVRP15151 417 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 HNRNPA2B1P22626 353 aaKnown RBP10.13□□□□□ -0.79
CALD1-210ENST00000443197 SHMT2P34897 504 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 MNX1P50219 401 aaPredicted RBP10.13□□□□□ -0.79
CALD1-210ENST00000443197 YBX1P67809 324 aaKnown RBP10.13□□□□□ -0.79
CALD1-210ENST00000443197 NDUFAF5Q5TEU4 345 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 SLCO4C1Q6ZQN7 724 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 C6orf120Q7Z4R8 191 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 TECPR1Q7Z6L1 1165 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 ABHD8Q96I13 439 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 SLC6A16Q9GZN6 736 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 TMEM168Q9H0V1 697 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 COMMD3-BMI1R4GMX3 469 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 KNTC1P50748 2209 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 C7orf72A4D263 438 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 ARNTLO00327 626 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 PSIP1O75475 530 aaKnown RBP10.13□□□□□ -0.79
CALD1-210ENST00000443197 C8BP07358 591 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 JUNDP17535 347 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 HBA1P69905 142 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 SUZ12Q15022 739 aaKnown RBP10.13□□□□□ -0.79
CALD1-210ENST00000443197 KIAA1161Q6NSJ0 714 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 KIAA1211LQ6NV74 962 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 TRIM46Q7Z4K8 759 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 SLC34A3Q8N130 599 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 CADM2Q8N3J6 435 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 NECTIN4Q96NY8 510 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 GIN1Q9NXP7 522 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 AASSQ9UDR5 926 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 SERGEFQ9UGK8 458 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 ENOPH1Q9UHY7 261 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 ZNF638Q14966 1978 aaKnown RBP10.13□□□□□ -0.79
CALD1-210ENST00000443197 CROCCQ5TZA2 2017 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 SLC5A10A0PJK1 596 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 GFYI3L273 518 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 GREM1O60565 184 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 TRMUO75648 421 aaKnown RBP10.13□□□□□ -0.79
CALD1-210ENST00000443197 LINGO3P0C6S8 592 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 MATN1P21941 496 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 FUT4P22083 530 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 PAICSP22234 425 aaKnown RBP10.13□□□□□ -0.79
CALD1-210ENST00000443197 TOP3AQ13472 1001 aaPredicted RBP10.13□□□□□ -0.79
CALD1-210ENST00000443197 ATP1A4Q13733 1029 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 C1DQ13901 141 aaKnown RBP10.13□□□□□ -0.79
CALD1-210ENST00000443197 CLEC12AQ5QGZ9 265 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 DEPDC1Q5TB30 811 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 TMEM107Q6UX40 140 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 PACRGLQ8N7B6 248 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 CNIH3Q8TBE1 160 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 CD320Q9NPF0 282 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 C8orf4Q9NR00 106 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 RHBDL2Q9NX52 303 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 TOR4AQ9NXH8 423 aa10.13□□□□□ -0.79
CALD1-210ENST00000443197 MYL12BO14950 172 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 B4GAT1O43505 415 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 UGDHO60701 494 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 CCNA2P20248 432 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 CD247P20963 164 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 IFNGR2P38484 337 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 OPRD1P41143 372 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 SMIM11AP58511 58 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 COPZ1P61923 177 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 KLHL12Q53G59 568 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 RPS26P11Q5JNZ5 115 aaPredicted RBP10.12□□□□□ -0.79
CALD1-210ENST00000443197 REEP3Q6NUK4 255 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 RP1L1Q8IWN7 2480 aaPredicted RBP10.12□□□□□ -0.79
CALD1-210ENST00000443197 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.12□□□□□ -0.79
CALD1-210ENST00000443197 KLHDC8BQ8IXV7 354 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 DEPDC4Q8N2C3 294 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 CHCHD4Q8N4Q1 142 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 FAM86B1Q8N7N1 296 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 COX18Q8N8Q8 333 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 Q8N9G6 341 aaPredicted RBP10.12□□□□□ -0.79
CALD1-210ENST00000443197 TOE1Q96GM8 510 aaKnown RBP10.12□□□□□ -0.79
CALD1-210ENST00000443197 TEFMQ96QE5 360 aaKnown RBP10.12□□□□□ -0.79
CALD1-210ENST00000443197 NRTNQ99748 197 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 FAM83CQ9BQN1 747 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 TPK1Q9H3S4 243 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 LMAN1LQ9HAT1 526 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 ANKHQ9HCJ1 492 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 STARD5Q9NSY2 213 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 TVP23BQ9NYZ1 205 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 P2RX2Q9UBL9 471 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 APOBEC3BQ9UH17 382 aaKnown RBP10.12□□□□□ -0.79
CALD1-210ENST00000443197 TRPM6Q9BX84 2022 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 SNTNA6NMZ2 147 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 RGS10O43665 173 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 KLK8O60259 260 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 BMP2P12643 396 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 PCSK2P16519 638 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 MYL12AP19105 171 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 CDK9P50750 372 aaKnown RBP10.12□□□□□ -0.79
CALD1-210ENST00000443197 RPL6Q02878 288 aaKnown RBP10.12□□□□□ -0.79
CALD1-210ENST00000443197 RPA4Q13156 261 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 CBLBQ13191 982 aa10.12□□□□□ -0.79
CALD1-210ENST00000443197 CAMK1Q14012 370 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms