RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 ARCQ7LC44 396 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 KRT77Q7Z794 578 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 PCGF5Q86SE9 256 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 ARHGEF19Q8IW93 802 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 NPWQ8N729 165 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 NFAM1Q8NET5 270 aaPredicted RBP6.43□□□□□ -1.38
SSXP3-201ENST00000442971 SLC22A18Q96BI1 424 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 ZNF653Q96CK0 615 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 ZNF837Q96EG3 531 aaPredicted RBP6.43□□□□□ -1.38
SSXP3-201ENST00000442971 FAHD2AQ96GK7 314 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 SRPK1Q96SB4 655 aaKnown RBP6.43□□□□□ -1.38
SSXP3-201ENST00000442971 FSD1LQ9BXM9 530 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 SAP130Q9H0E3 1048 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 UGT1A10Q9HAW8 530 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 NT5MQ9NPB1 228 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 ADAM22Q9P0K1 906 aa6.43□□□□□ -1.38
SSXP3-201ENST00000442971 SAGE2PA6NJ88 616 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 LRRC3CA6NJW4 275 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 H0YGG7 62 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 CCDC188H7C350 402 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 GPR39O43194 453 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 NRP2O60462 931 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 CGAP01215 116 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 MMP2P08253 660 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 TACSTD2P09758 323 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 NHLRC4P0CG21 123 aaPredicted RBP6.42□□□□□ -1.38
SSXP3-201ENST00000442971 MSH3P20585 1137 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 GDF1P27539 372 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 SDC4P31431 198 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 AKT1P31749 480 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 TTKP33981 857 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 AVPR1BP47901 424 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 ARF3P61204 181 aaPredicted RBP6.42□□□□□ -1.38
SSXP3-201ENST00000442971 PHC1P78364 1004 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 GALNT2Q10471 571 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 EXOC3L2Q2M3D2 409 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 BCL7AQ4VC05 210 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 TBCELQ5QJ74 424 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 SCIMPQ6UWF3 145 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 RNF44Q7L0R7 432 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 ARHGEF39Q8N4T4 335 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 SVOPQ8N4V2 548 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 C2orf73Q8N5S3 287 aaPredicted RBP6.42□□□□□ -1.38
SSXP3-201ENST00000442971 CSNK1A1LQ8N752 337 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 APCDD1LQ8NCL9 501 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 PHF21AQ96BD5 680 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 SGCZQ96LD1 299 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 SNX18Q96RF0 628 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 GPR63Q9BZJ6 419 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 ACTR6Q9GZN1 396 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 LIN28AQ9H9Z2 209 aaKnown RBP6.42□□□□□ -1.38
SSXP3-201ENST00000442971 CLCF1Q9UBD9 225 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 POLG2Q9UHN1 485 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 ZDHHC2Q9UIJ5 367 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 RUVBL2Q9Y230 463 aaKnown RBP6.42□□□□□ -1.38
SSXP3-201ENST00000442971 HPSEQ9Y251 543 aa6.42□□□□□ -1.38
SSXP3-201ENST00000442971 H0YIG0 161 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 EPB41L2O43491 1005 aaKnown RBP6.41□□□□□ -1.38
SSXP3-201ENST00000442971 RAMP1O60894 148 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 CDC123O75794 336 aaPredicted RBP6.41□□□□□ -1.38
SSXP3-201ENST00000442971 TRAPPC6AO75865 159 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 PIRTP0C851 137 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 CD8BP10966 210 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 CHMP24386 653 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 KIR2DL2P43627 348 aaPredicted RBP6.41□□□□□ -1.38
SSXP3-201ENST00000442971 CDH11P55287 796 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 BSPH1Q075Z2 132 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 POU4F2Q12837 409 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 FAM53BQ14153 422 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 CYP1B1Q16678 543 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 CCDC40Q4G0X9 1142 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 ZNF362Q5T0B9 420 aaPredicted RBP6.41□□□□□ -1.38
SSXP3-201ENST00000442971 STAC2Q6ZMT1 411 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 SPATC1Q76KD6 591 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 C1QL2Q7Z5L3 287 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 ATG4DQ86TL0 474 aaPredicted RBP6.41□□□□□ -1.38
SSXP3-201ENST00000442971 TBC1D21Q8IYX1 336 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 LINC01555Q8NAE3 123 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 OR9A4Q8NGU2 314 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 OR4F5Q8NH21 305 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 FAM172AQ8WUF8 416 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 NSMCE1Q8WV22 266 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 CENPIQ92674 756 aaPredicted RBP6.41□□□□□ -1.38
SSXP3-201ENST00000442971 SYN2Q92777 582 aaPredicted RBP6.41□□□□□ -1.38
SSXP3-201ENST00000442971 ABTB1Q969K4 478 aaPredicted RBP6.41□□□□□ -1.38
SSXP3-201ENST00000442971 ZNF845Q96IR2 970 aaPredicted RBP6.41□□□□□ -1.38
SSXP3-201ENST00000442971 CSPG4P5Q96PW8 444 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 LRRC37BQ96QE4 947 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 RASL10BQ96S79 203 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 POLR1EQ9GZS1 481 aaKnown RBP6.41□□□□□ -1.38
SSXP3-201ENST00000442971 COG4Q9H9E3 785 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 TCF7L1Q9HCS4 588 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 BPIFA1Q9NP55 256 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 SAMD15Q9P1V8 674 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 TESQ9UGI8 421 aaKnown RBP6.41□□□□□ -1.38
SSXP3-201ENST00000442971 ASF1AQ9Y294 204 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 PCDHGA11Q9Y5H2 935 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 WNK2Q9Y3S1 2297 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 STARD9Q9P2P6 4700 aa6.41□□□□□ -1.38
SSXP3-201ENST00000442971 SHISA9B4DS77 424 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms