RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SLC29A3Q9BZD2 475 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 SLC25A18Q9H1K4 315 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 OR51B5Q9H339 312 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 C12orf65Q9H3J6 166 aaKnown RBP11.14□□□□□ -0.63
HSPG2-206ENST00000439717 ELOVL6Q9H5J4 265 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 LYRM4Q9HD34 91 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 SSU72Q9NP77 194 aaKnown RBP11.14□□□□□ -0.63
HSPG2-206ENST00000439717 ZNF225Q9UK10 706 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 RALYQ9UKM9 306 aaKnown RBP11.14□□□□□ -0.63
HSPG2-206ENST00000439717 PCDHGB7Q9Y5F8 929 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 PCDHGA9Q9Y5G4 932 aaKnown RBP11.14□□□□□ -0.63
HSPG2-206ENST00000439717 ACTL7BQ9Y614 415 aa11.14□□□□□ -0.63
HSPG2-206ENST00000439717 IGSF10Q6WRI0 2623 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 IGHV1-45A0A0A0MS14 117 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 NSG1A0A0A6YYJ2 146 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 A0A1B0GTL3 188 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 SYNDIG1LA6NDD5 238 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 EIF4E1BA6NMX2 242 aaKnown RBP11.13□□□□□ -0.63
HSPG2-206ENST00000439717 PPP6CO00743 305 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 CTIFO43310 598 aaKnown RBP11.13□□□□□ -0.63
HSPG2-206ENST00000439717 TYROBPO43914 113 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 SPAG7O75391 227 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 DNAJB5O75953 348 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 OR4F21O95013 312 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 ESRRBO95718 433 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 KRT6AP02538 564 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 KRT6BP04259 564 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 ENO1P06733 434 aaKnown RBP11.13□□□□□ -0.63
HSPG2-206ENST00000439717 MYZAPP0CAP1 466 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 HIST1H1TP22492 207 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-206ENST00000439717 ATP5A1P25705 553 aaKnown RBP11.13□□□□□ -0.63
HSPG2-206ENST00000439717 SSR2P43308 183 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 KRT6CP48668 564 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 EFNA3P52797 238 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 ZNF33BQ06732 778 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 CHAF1BQ13112 559 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 PCLAFQ15004 111 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 OR4C11Q6IEV9 310 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 TCTN3Q6NUS6 607 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 QSOX2Q6ZRP7 698 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 FRMD7Q6ZUT3 714 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 ZNF595Q8IYB9 648 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 SHISA5Q8N114 240 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 ZCCHC7Q8N3Z6 543 aaKnown RBP11.13□□□□□ -0.63
HSPG2-206ENST00000439717 GALNT16Q8N428 558 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 RNF175Q8N4F7 328 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 CCNYL1Q8N7R7 359 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 ACOT4Q8N9L9 421 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 C9orf43Q8TAL5 461 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-206ENST00000439717 C8orf44Q96CB5 159 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 ABHD17AQ96GS6 310 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 FAM111AQ96PZ2 611 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 SLC25A23Q9BV35 468 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 RBCK1Q9BYM8 510 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 ZNF700Q9H0M5 742 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 STMN4Q9H169 189 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-206ENST00000439717 BRF2Q9HAW0 419 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 RIC8BQ9NVN3 520 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 NMRK1Q9NWW6 199 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 AHSPQ9NZD4 102 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 DAPP1Q9UN19 280 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 MRPS33Q9Y291 106 aaKnown RBP11.13□□□□□ -0.63
HSPG2-206ENST00000439717 MMACHCQ9Y4U1 282 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 SPACA6W5XKT8 324 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 CCDC88CQ9P219 2028 aa11.13□□□□□ -0.63
HSPG2-206ENST00000439717 PCSK5Q92824 1860 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 BLACEA4D250 179 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 SAP18O00422 153 aaKnown RBP11.12□□□□□ -0.63
HSPG2-206ENST00000439717 RTCAO00442 366 aaKnown RBP11.12□□□□□ -0.63
HSPG2-206ENST00000439717 CLDN4O14493 209 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 PLPP1O14494 284 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 PRMT3O60678 531 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 TRIM13O60858 407 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 B4GALT2O60909 372 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 SH3BGRLO75368 114 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 CDC123O75794 336 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-206ENST00000439717 COX6A1P12074 109 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 ICAM2P13598 275 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 HSD3B1P14060 373 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 CREB1P16220 341 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 HSD3B2P26439 372 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 CERS1P27544 350 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 HMOX2P30519 316 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 LIM2P55344 173 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 HSD17B7P56937 341 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 AP2B1P63010 937 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 ABRAXAS2Q15018 415 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 NSDHLQ15738 373 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 FAAH2Q6GMR7 532 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 ZNF793Q6ZN11 406 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 CPEB2Q7Z5Q1 589 aaKnown RBP11.12□□□□□ -0.63
HSPG2-206ENST00000439717 ANKRD37Q7Z713 158 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 EXOC3L1Q86VI1 746 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 HPS6Q86YV9 775 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 C10orf107Q8IVU9 208 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 HOMEZQ8IX15 550 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 CDYL2Q8N8U2 506 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 C7orf57Q8NEG2 295 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 METTL6Q8TCB7 284 aa11.12□□□□□ -0.63
HSPG2-206ENST00000439717 AGAP11Q8TF27 550 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms