RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 OR8J2Q8NGG1 315 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 OR4A15Q8NGL6 344 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 KCNG3Q8TAE7 436 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PNPT1Q8TCS8 783 aaKnown RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CHPT1Q8WUD6 406 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CACNG8Q8WXS5 425 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 IGSF8Q969P0 613 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 MCHR2Q969V1 340 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 MRGPRFQ96AM1 343 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 MSI2Q96DH6 328 aaKnown RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 SPDL1Q96EA4 605 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 COQ2Q96H96 371 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 BOD1Q96IK1 185 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PBKQ96KB5 322 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 RASL10BQ96S79 203 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 SMOQ99835 787 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 TRMOQ9BU70 441 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PRRG3Q9BZD7 231 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 UPF3BQ9BZI7 483 aaKnown RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 WWTR1Q9GZV5 400 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 WWP1Q9H0M0 922 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 GAL3ST2Q9H3Q3 398 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CUEDC2Q9H467 287 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 DPEP3Q9H4B8 488 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 SAP30LQ9HAJ7 183 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 SLC28A3Q9HAS3 691 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 RAB9BQ9NP90 201 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 MYNNQ9NPC7 610 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 TRIM36Q9NQ86 728 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 ENTPD7Q9NQZ7 604 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM248Q9NWD8 314 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 HACD3Q9P035 362 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 FOXJ3Q9UPW0 622 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 RUVBL2Q9Y230 463 aaKnown RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZNF510Q9Y2H8 683 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 PKP3Q9Y446 797 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 LSM4Q9Y4Z0 139 aaKnown RBP3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CLIC4Q9Y696 253 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 MAD1L1Q9Y6D9 718 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 CGNL1Q0VF96 1302 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 TTC21AQ8NDW8 1320 aa3.42□□□□□ -1.86
HMGB1P12-201ENST00000438594 TRGV11A0A075B6L2 103 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 GOLGA8QA0A0J9YX86 632 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 C1orf232A0A0U1RR37 186 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM129A0AVI4 362 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 PDZK1P1A8MUH7 402 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 PDXKO00764 312 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 SDHDO14521 159 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 ARPC3O15145 178 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 SLC22A2O15244 555 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 KDELR3O43731 214 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 DUX1O43812 170 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 LCMT2O60294 686 aaKnown RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 HCN1O60741 890 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 PRAF2O60831 178 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 TM7SF2O76062 418 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 VNN1O95497 513 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 PROS1P07225 676 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 NR2F6P10588 404 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 FCER1AP12319 257 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 B4GALT1P15291 398 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 TPSB2P20231 275 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 NT5EP21589 574 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 UQCRC2P22695 453 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 DGKAP23743 735 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 MARCKSP29966 332 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 HOXA9P31269 272 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 GABRA5P31644 462 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 PRDX2P32119 198 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 PTGER1P34995 402 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 NAA10P41227 235 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 PTGFRP43088 359 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 CBX5P45973 191 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 NSFP46459 744 aaKnown RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 OR3A1P47881 315 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 MTHFSP49914 203 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 ASCL1P50553 236 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 C21orf59P57076 290 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 EEF1A1P68104 462 aaKnown RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 IRF8Q02556 426 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 EEF1A2Q05639 463 aaKnown RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 CALCOCO2Q13137 446 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 ILKQ13418 452 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 NAE1Q13564 534 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 ELAVL3Q14576 367 aaKnown RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 TGFBIQ15582 683 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 TPSAB1Q15661 275 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 CARTPTQ16568 116 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 POM121L1PQ3SYA9 428 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZC2HC1CQ53FD0 456 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 SLC25A53Q5H9E4 307 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 CTSL3PQ5NE16 218 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 C6orf10Q5SRN2 563 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 CLVS2Q5SYC1 327 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 C6orf141Q5SZD1 244 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 PDZK1Q5T2W1 519 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZNF618Q5T7W0 954 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 EEF1A1P5Q5VTE0 462 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 NKAIN2Q5VXU1 208 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms