RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 ORC6Q9Y5N6 252 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 GMPPBQ9Y5P6 360 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 SH3PXD2BA1X283 911 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 C1QTNF3-AMACRE9PGA6 284 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 AGRPO00253 132 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 SH3BP5O60239 455 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 TPST2O60704 377 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 PRKRAO75569 313 aaKnown RBP9.06□□□□□ -0.96
CUX1-206ENST00000437600 KLHL18O94889 574 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 CCNA2P20248 432 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 CD6P30203 668 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 ARHGDIAP52565 204 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 RPP38P78345 283 aaKnown RBP9.06□□□□□ -0.96
CUX1-206ENST00000437600 MTAPQ13126 283 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 WSCD2Q2TBF2 565 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 ITPRIPL2Q3MIP1 535 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 RPS26P11Q5JNZ5 115 aaPredicted RBP9.06□□□□□ -0.96
CUX1-206ENST00000437600 CAPN13Q6MZZ7 669 aaPredicted RBP9.06□□□□□ -0.96
CUX1-206ENST00000437600 TNFAIP8L2Q6P589 184 aaPredicted RBP9.06□□□□□ -0.96
CUX1-206ENST00000437600 GALNT18Q6P9A2 607 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 AHSA2Q719I0 299 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 ADCK2Q7Z695 626 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 OR14C36Q8NHC7 312 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 ELSPBP1Q96BH3 223 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 FEVQ99581 238 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 SLC35A5Q9BS91 424 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 TRPV4Q9HBA0 871 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 ASIC5Q9NY37 505 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 RAB23Q9ULC3 237 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 SAMD4AQ9UPU9 718 aaKnown RBP9.06□□□□□ -0.96
CUX1-206ENST00000437600 TMED5Q9Y3A6 229 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 SCN3AQ9NY46 2000 aa9.06□□□□□ -0.96
CUX1-206ENST00000437600 TRBV23OR9-2A0A075B6M9 112 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 PIPSLA2A3N6 862 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 H0YIV9 168 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 SLC31A1O15431 190 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 SUV39H1O43463 412 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 PCDHGA12O60330 932 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 BCAS1O75363 584 aaPredicted RBP9.05□□□□□ -0.96
CUX1-206ENST00000437600 FUCA1P04066 466 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 APODP05090 189 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 LCKP06239 509 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 IL3P08700 152 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 ATXN8OSP0DMR3 200 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 HOXB3P14651 431 aaPredicted RBP9.05□□□□□ -0.96
CUX1-206ENST00000437600 DCKP27707 260 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 PSMB9P28065 219 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 GP2P55259 537 aaKnown RBP9.05□□□□□ -0.96
CUX1-206ENST00000437600 CDH12P55289 794 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 ATP1A4Q13733 1029 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 ZNF691Q5VV52 312 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 GRHL2Q6ISB3 625 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 TMEM53Q6P2H8 277 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 SERPINA11Q86U17 422 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 PEX5LQ8IYB4 626 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 SLC15A4Q8N697 577 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 FLCNQ8NFG4 579 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 OR9Q2Q8NGE9 314 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 OR8J2Q8NGG1 315 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 OR56A3Q8NH54 315 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 TBC1D15Q8TC07 691 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 UTP15Q8TED0 518 aaKnown RBP9.05□□□□□ -0.96
CUX1-206ENST00000437600 GTPBP3Q969Y2 492 aaKnown RBP9.05□□□□□ -0.96
CUX1-206ENST00000437600 C19orf43Q9BQ61 176 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 SLC6A16Q9GZN6 736 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 KRT84Q9NSB2 600 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 CA5BQ9Y2D0 317 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 SCN2AQ99250 2005 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 PLXNA2O75051 1894 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 PLXND1Q9Y4D7 1925 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 TMEM247A6NEH6 219 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 LILRB5O75023 590 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 C7P10643 843 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 RAD23AP54725 363 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 KCNJ10P78508 379 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 DMPKQ09013 629 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 FGL2Q14314 439 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 DUSP7Q16829 419 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 PRPF38BQ5VTL8 546 aaKnown RBP9.05□□□□□ -0.96
CUX1-206ENST00000437600 AGBL4Q5VU57 503 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 VPS37AQ8NEZ2 397 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 ZFP90Q8TF47 636 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 TFGQ92734 400 aaPredicted RBP9.05□□□□□ -0.96
CUX1-206ENST00000437600 PROX1Q92786 737 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 VPS35Q96QK1 796 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 NIPSNAP1Q9BPW8 284 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 WFDC6Q9BQY6 131 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 REEP1Q9H902 201 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 ANKRA2Q9H9E1 313 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 PLGRKTQ9HBL7 147 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 CTPS2Q9NRF8 586 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 TMEM45AQ9NWC5 275 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 SNX5Q9Y5X3 404 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 C1orf226A1L170 272 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 K7EQS6 105 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 PCDH17O14917 1159 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 SLC16A5O15375 505 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 C1GALT1C1LP0DN25 315 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 POU1F1P28069 291 aa9.05□□□□□ -0.96
CUX1-206ENST00000437600 TIA1P31483 386 aaKnown RBP eCLIP9.05□□□□□ -0.961e-6■■■■□ 21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms