RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 SPACA6W5XKT8 324 aa13.91□□□□□ -0.18
TNFAIP3-204ENST00000433680 SCN3AQ9NY46 2000 aa13.91□□□□□ -0.18
TNFAIP3-204ENST00000433680 NUP210LQ5VU65 1888 aa13.91□□□□□ -0.18
TNFAIP3-204ENST00000433680 CELSR3Q9NYQ7 3312 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 CFAP47Q6ZTR5 3102 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 A0A0G2JN53 185 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 ZNF860A6NHJ4 632 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 SAP18O00422 153 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 ETHE1O95571 254 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 B3GALT4O96024 378 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 UMODP07911 640 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 MMP11P24347 488 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 ATP5A1P25705 553 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 CCR10P46092 362 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 WDR4P57081 412 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 CDC20Q12834 499 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 ERV3-1Q14264 604 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 TUBB8Q3ZCM7 444 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 NUDT13Q86X67 352 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 CLYBLQ8N0X4 340 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 CA13Q8N1Q1 262 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 ZCCHC7Q8N3Z6 543 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 OR5T3Q8NGG3 340 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 MGARPQ8TDB4 240 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 ADAMTS17Q8TE56 1095 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 TBC1D20Q96BZ9 403 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 PEX11GQ96HA9 241 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 KCNA7Q96RP8 456 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 PRORYQ9H606 182 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 DDX31Q9H8H2 851 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 MS4A12Q9NXJ0 267 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 ADAM29Q9UKF5 820 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 DAPP1Q9UN19 280 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 SLC12A4Q9UP95 1085 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 MRPS33Q9Y291 106 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 TRAF6Q9Y4K3 522 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 TIMM22Q9Y584 194 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 SEC16AO15027 2179 aa13.9□□□□□ -0.18
TNFAIP3-204ENST00000433680 BLACEA4D250 179 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 CDC14CA4D256 554 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 SYNDIG1LA6NDD5 238 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 IDSB3KWA1 339 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 NKX2-8O15522 239 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 SH3BGRLO75368 114 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 HSPA4LO95757 839 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 CHRNGP07510 517 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 HEXBP07686 556 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 FHP07954 510 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 CERS1P27544 350 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 BSGP35613 385 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 EMP2P54851 167 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 FOXA1P55317 472 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 LIM2P55344 173 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 RAB38P57729 211 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 ABCE1P61221 599 aaKnown RBP13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 OLR1P78380 273 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 STX3Q13277 289 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 IL10RAQ13651 578 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 RUNX2Q13950 521 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 ABRAXAS2Q15018 415 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 TCHHL1Q5QJ38 904 aaPredicted RBP13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 KANK2Q63ZY3 851 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 ATG16L1Q676U5 607 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 ZNF793Q6ZN11 406 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 GPR155Q7Z3F1 870 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 TRIM46Q7Z4K8 759 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 METTL4Q8N3J2 472 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 C7orf57Q8NEG2 295 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 CCT7Q99832 543 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 SHCBP1LQ9BZQ2 653 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 MLXIPLQ9NP71 852 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 PFDN4Q9NQP4 134 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 LYARQ9NX58 379 aaKnown RBP13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 C3orf18Q9UK00 162 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 MKL2Q9ULH7 1088 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 POLHQ9Y253 713 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 ZZEF1O43149 2961 aa13.89□□□□□ -0.19
TNFAIP3-204ENST00000433680 ARHGAP10A1A4S6 786 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 SLC28A1O00337 649 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 RTCAO00442 366 aaKnown RBP13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 PEX12O00623 359 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 ITGB2P05107 769 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 PRKAR1AP10644 381 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 BGNP21810 368 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 OTX2P32243 289 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 SLC1A6P48664 564 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 HTR6P50406 440 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 PPP2R2AP63151 447 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 TBL3Q12788 808 aaKnown RBP13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 SLAMF1Q13291 335 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 IMPG1Q17R60 797 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 MINDY4Q4G0A6 757 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 SPIN4Q56A73 249 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 HSP90B2PQ58FF3 399 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 SH2D4BQ5SQS7 431 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 MFSD4BQ5TF39 518 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 CLEC6AQ6EIG7 209 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 CYP20A1Q6UW02 462 aa13.88□□□□□ -0.19
TNFAIP3-204ENST00000433680 SHISA6Q6ZSJ9 500 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms