RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 VTI1BQ9UEU0 232 aa14.53□□□□□ -0.08
CNOT9-205ENST00000433439 FBXW2Q9UKT8 454 aa14.53□□□□□ -0.08
CNOT9-205ENST00000433439 POLR3HQ9Y535 204 aaPredicted RBP14.53□□□□□ -0.08
CNOT9-205ENST00000433439 USH1CQ9Y6N9 552 aa14.53□□□□□ -0.08
CNOT9-205ENST00000433439 GNG14A0A1W2PPG7 69 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 TRPC5OSA6NMA1 111 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 H0YIG0 161 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 MYO1DO94832 1006 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 TCN2P20062 427 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 SHC2P98077 582 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 DSG2Q14126 1118 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 ATP6AP1LQ52LC2 224 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 SPIN4Q56A73 249 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 XKR7Q5GH72 579 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 MFSD4BQ5TF39 518 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 NXNQ6DKJ4 435 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 NIPAL1Q6NVV3 410 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 COX15Q7KZN9 410 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 PAGE2Q7Z2X7 111 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 EFCAB3Q8N7B9 438 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 OR51Q1Q8NH59 317 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 CT55Q8WUE5 264 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 CHTF18Q8WVB6 975 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 PPP3R2Q96LZ3 170 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 ZNF717Q9BY31 904 aaPredicted RBP14.52□□□□□ -0.09
CNOT9-205ENST00000433439 CCDC134Q9H6E4 229 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 CCDC86Q9H6F5 360 aaKnown RBP14.52□□□□□ -0.09
CNOT9-205ENST00000433439 NPHS2Q9NP85 383 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 SLC22A11Q9NSA0 550 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 CTSFQ9UBX1 484 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 CCL27Q9Y4X3 112 aa14.52□□□□□ -0.09
CNOT9-205ENST00000433439 MAP1BP46821 2468 aaKnown RBP14.51□□□□□ -0.09
CNOT9-205ENST00000433439 PSMD12O00232 456 aaPredicted RBP14.51□□□□□ -0.09
CNOT9-205ENST00000433439 SDHDO14521 159 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 LSM1O15116 133 aaKnown RBP14.51□□□□□ -0.09
CNOT9-205ENST00000433439 PCDH7O60245 1069 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 LIPCP11150 499 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 EPHA3P29320 983 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 DLSTP36957 453 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 XCR1P46094 333 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 MAPK12P53778 367 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 AQP5P55064 265 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 FOXL2P58012 376 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 OCA2Q04671 838 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 ERV3-1Q14264 604 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 SLC9B1Q4ZJI4 515 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 VWA2Q5GFL6 755 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 RNF165Q6ZSG1 346 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 SHISA6Q6ZSJ9 500 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 MAVSQ7Z434 540 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 CA13Q8N1Q1 262 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 FAM47BQ8NA70 645 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 FNDC5Q8NAU1 212 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 FGF11Q92914 225 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 NKD1Q969G9 470 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 CCT7Q99832 543 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 MAPKAP1Q9BPZ7 522 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 DPH2Q9BQC3 489 aaPredicted RBP14.51□□□□□ -0.09
CNOT9-205ENST00000433439 C1orf50Q9BV19 199 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 FAM107BQ9H098 131 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 DDX31Q9H8H2 851 aaKnown RBP14.51□□□□□ -0.09
CNOT9-205ENST00000433439 AKTIPQ9H8T0 292 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 MEAF6Q9HAF1 191 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 ZNF282Q9UDV7 671 aaPredicted RBP14.51□□□□□ -0.09
CNOT9-205ENST00000433439 DCTN4Q9UJW0 460 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 CROTQ9UKG9 612 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 MAP4K5Q9Y4K4 846 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 FER1L5A0AVI2 2057 aa14.51□□□□□ -0.09
CNOT9-205ENST00000433439 A0A0A6YYD5 115 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 LOC101059948A0A1B0GTJ6 334 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 FAM227AF5H4B4 570 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 TLX3O43711 291 aaPredicted RBP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 TMPRSS11DO60235 418 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 B4GALT2O60909 372 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 JRKO75564 520 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 CDC123O75794 336 aaPredicted RBP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 ANXA4P09525 319 aaPredicted RBP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 FAM58BPP0C7Q3 252 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 TROVE2P10155 538 aaKnown RBP eCLIP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 RNH1P13489 461 aaKnown RBP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 CPN2P22792 545 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 TPP2P29144 1249 aaPredicted RBP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 TIA1P31483 386 aaKnown RBP eCLIP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 LSP1P33241 339 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 STAT5AP42229 794 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 TSFMP43897 325 aaKnown RBP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 HK2P52789 917 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 SEC24CP53992 1094 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 LIM2P55344 173 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 HNRNPH2P55795 449 aaKnown RBP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 PCBP4P57723 403 aaKnown RBP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 RAE1P78406 368 aaKnown RBP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 MAP7Q14244 749 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 RFTN2Q52LD8 501 aaPredicted RBP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 FAM69BQ5VUD6 431 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 FAM198BQ6UWH4 519 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 OVCH1Q7RTY7 1134 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 VASH2Q86V25 355 aa14.5□□□□□ -0.09
CNOT9-205ENST00000433439 ZCCHC7Q8N3Z6 543 aaKnown RBP14.5□□□□□ -0.09
CNOT9-205ENST00000433439 ENDOVQ8N8Q3 282 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms