RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 OTX2P32243 289 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 SCTRP47872 440 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 ARFIP2P53365 341 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 FOXA1P55317 472 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 CBX1P83916 185 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 TGM3Q08188 693 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 CSTF3Q12996 717 aaKnown RBP13.53□□□□□ -0.24
LAMA4-208ENST00000431543 DDX39BQ13838 428 aaKnown RBP13.53□□□□□ -0.24
LAMA4-208ENST00000431543 GKAP1Q5VSY0 366 aaPredicted RBP13.53□□□□□ -0.24
LAMA4-208ENST00000431543 CPZQ66K79 652 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 RNF165Q6ZSG1 346 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 TRIM46Q7Z4K8 759 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 CAMKVQ8NCB2 501 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 HUS1BQ8NHY5 278 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 CMTM7Q96FZ5 175 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 RILPQ96NA2 401 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 CCT8L2Q96SF2 557 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 SERPINI1Q99574 410 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 ELAC2Q9BQ52 826 aaKnown RBP13.53□□□□□ -0.24
LAMA4-208ENST00000431543 NUF2Q9BZD4 464 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 FAM117AQ9C073 453 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 BRF2Q9HAW0 419 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 ZNF304Q9HCX3 659 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 AHSPQ9NZD4 102 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 KLHL14Q9P2G3 628 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 CTSFQ9UBX1 484 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 MAN2B2Q9Y2E5 1009 aa13.53□□□□□ -0.24
LAMA4-208ENST00000431543 A0A0A6YYC8 382 aaPredicted RBP13.52□□□□□ -0.25
LAMA4-208ENST00000431543 A0A0G2JND7 137 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 ARGFXA6NJG6 315 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 TMEM233B4DJY2 109 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 I3L1I5 382 aaPredicted RBP13.52□□□□□ -0.25
LAMA4-208ENST00000431543 K7EM74 188 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 MASP2O00187 686 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 PIP5K1BO14986 540 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 PRAMEF4O60810 478 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 DIAPH2O60879 1101 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 SKAP2O75563 359 aaPredicted RBP13.52□□□□□ -0.25
LAMA4-208ENST00000431543 CLEC3AO75596 197 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 PDYNP01213 254 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 SLC35G6P0C7Q6 338 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 LINC00032P0C843 101 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 CD22P20273 847 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 DRD4P21917 467 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 NEK2P51955 445 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 RGS1Q08116 209 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 KCNAB2Q13303 367 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 ABRAXAS2Q15018 415 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 NKG7Q16617 165 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 MUM1Q2TAK8 710 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 UGT3A2Q3SY77 523 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 SPDYAQ5MJ70 313 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 PRAMEF9Q5VWM5 478 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 ATG14Q6ZNE5 492 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 SPATA21Q7Z572 469 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 ASPGQ86U10 573 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 OR2Y1Q8NGV0 311 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 WDR20Q8TBZ3 569 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 SLC13A3Q8WWT9 602 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 THAP4Q8WY91 577 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 COL26A1Q96A83 441 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 TM4SF19Q96DZ7 209 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 PPP3R2Q96LZ3 170 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 MTERF1Q99551 399 aaKnown RBP13.52□□□□□ -0.25
LAMA4-208ENST00000431543 C17orf62Q9BQA9 187 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 MESP1Q9BRJ9 268 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 MEAF6Q9HAF1 191 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 TNFRSF12AQ9NP84 129 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 VPS29Q9UBQ0 182 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 DCTN4Q9UJW0 460 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 TRIM33Q9UPN9 1127 aa13.52□□□□□ -0.25
LAMA4-208ENST00000431543 MED13Q9UHV7 2174 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 NDUFAB1O14561 156 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 MYO1DO94832 1006 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 ALOX15P16050 662 aaPredicted RBP13.51□□□□□ -0.25
LAMA4-208ENST00000431543 FOLR3P41439 243 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 EMP3P54852 163 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 STXBP1P61764 594 aaKnown RBP13.51□□□□□ -0.25
LAMA4-208ENST00000431543 BTKQ06187 659 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 MAD2L1Q13257 205 aaPredicted RBP13.51□□□□□ -0.25
LAMA4-208ENST00000431543 PWP1Q13610 501 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 ATP1A4Q13733 1029 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 SSPNQ14714 243 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 SYT16Q17RD7 645 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 ATP6AP1LQ52LC2 224 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 TMEM35AQ53FP2 167 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 NXNQ6DKJ4 435 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 EPGNQ6UW88 154 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 PRSS41Q7RTY9 318 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 PARP9Q8IXQ6 854 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 PRSS58Q8IYP2 241 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 ANKS4BQ8N8V4 417 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 KCT2Q8NC54 265 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 SRFBP1Q8NEF9 429 aaKnown RBP13.51□□□□□ -0.25
LAMA4-208ENST00000431543 BCAS4Q8TDM0 211 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 FKBP10Q96AY3 582 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 TUBGCP3Q96CW5 907 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 MMABQ96EY8 250 aaPredicted RBP13.51□□□□□ -0.25
LAMA4-208ENST00000431543 ABHD17AQ96GS6 310 aa13.51□□□□□ -0.25
LAMA4-208ENST00000431543 METTL2AQ96IZ6 378 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms