RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 MSL3P1P0C860 447 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 ALOX15P16050 662 aaPredicted RBP9.53□□□□□ -0.88
ATG4B-212ENST00000430617 EPORP19235 508 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 POLR2CP19387 275 aaPredicted RBP9.53□□□□□ -0.88
ATG4B-212ENST00000430617 CDH3P22223 829 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 MMP11P24347 488 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 IMPA1P29218 277 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 HNMTP50135 292 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 NAA20P61599 178 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 ARG2P78540 354 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 RBPJQ06330 500 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 LCP2Q13094 533 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 FBXO48Q5FWF7 155 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 ARL13AQ5H913 290 aaPredicted RBP9.53□□□□□ -0.88
ATG4B-212ENST00000430617 LRRC70Q7Z2Q7 622 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 OOSP2Q86WS3 158 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 FAM20CQ8IXL6 584 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 CARFQ8N187 725 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 CCNYL1Q8N7R7 359 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 ZNF781Q8N8C0 355 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 OR5AR1Q8NGP9 310 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 OR5K2Q8NHB8 316 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 ZNF473Q8WTR7 871 aaKnown RBP9.53□□□□□ -0.88
ATG4B-212ENST00000430617 CA5BP1Q8WTZ4 195 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 C18orf12Q96KH6 178 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 FOPNLQ96NB1 174 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 CCT8L2Q96SF2 557 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 INSM2Q96T92 566 aaPredicted RBP9.53□□□□□ -0.88
ATG4B-212ENST00000430617 PKP4Q99569 1192 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 NRTNQ99748 197 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 EGFL8Q99944 293 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 ZNF559Q9BR84 538 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 RABEP2Q9H5N1 569 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 ZBTB26Q9HCK0 441 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 TNFRSF12AQ9NP84 129 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 SLC22A11Q9NSA0 550 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 WWOXQ9NZC7 414 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.53□□□□□ -0.88
ATG4B-212ENST00000430617 STOX2Q9P2F5 926 aaPredicted RBP9.53□□□□□ -0.88
ATG4B-212ENST00000430617 DHCR7Q9UBM7 475 aaKnown RBP9.53□□□□□ -0.88
ATG4B-212ENST00000430617 NDOR1Q9UHB4 597 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 HS3ST3B1Q9Y662 390 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 TRAV17A0A0B4J275 112 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 IFRD1O00458 451 aaPredicted RBP9.52□□□□□ -0.89
ATG4B-212ENST00000430617 PROM1O43490 865 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 SNX3O60493 162 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 SUPT7LO94864 414 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 RASAL1O95294 804 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 TGDSO95455 350 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 SLC16A8O95907 504 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 HEXAP06865 529 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 INHBBP09529 407 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 MTHFD1P11586 935 aaKnown RBP9.52□□□□□ -0.89
ATG4B-212ENST00000430617 PVRP15151 417 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 HALP42357 657 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 HSPA7P48741 367 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 DCDP81605 110 aaKnown RBP9.52□□□□□ -0.89
ATG4B-212ENST00000430617 CLCQ05315 142 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 TRAF3Q13114 568 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 IRAK1BP1Q5VVH5 260 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 TTC23LQ6PF05 361 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 C3P1Q6ZMU1 363 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 Q6ZPB1 254 aaPredicted RBP9.52□□□□□ -0.89
ATG4B-212ENST00000430617 MAVSQ7Z434 540 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 GOLGA7Q7Z5G4 137 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 PIGWQ7Z7B1 504 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 LRRC56Q8IYG6 542 aaPredicted RBP9.52□□□□□ -0.89
ATG4B-212ENST00000430617 TBC1D21Q8IYX1 336 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 OR56A3Q8NH54 315 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 CFAP61Q8NHU2 1237 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 MCOLN3Q8TDD5 553 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 AGAP11Q8TF27 550 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 ZNF480Q8WV37 535 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 C10orf82Q8WW14 230 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 PSMF1Q92530 271 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 TFGQ92734 400 aaPredicted RBP9.52□□□□□ -0.89
ATG4B-212ENST00000430617 ESAMQ96AP7 390 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 SDCCAG3Q96C92 435 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 CCDC138Q96M89 665 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 C12orf66Q96MD2 445 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 ZNF382Q96SR6 550 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 C17orf62Q9BQA9 187 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 TRIM54Q9BYV2 358 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 CD244Q9BZW8 370 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 SPRTNQ9H040 489 aaPredicted RBP9.52□□□□□ -0.89
ATG4B-212ENST00000430617 FAM107BQ9H098 131 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 C1GALT1Q9NS00 363 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 IMP3Q9NV31 184 aaKnown RBP9.52□□□□□ -0.89
ATG4B-212ENST00000430617 SPATA7Q9P0W8 599 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 POMT2Q9UKY4 750 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 ASF1AQ9Y294 204 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 PLEKHA6Q9Y2H5 1048 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 RAP2CQ9Y3L5 183 aa9.52□□□□□ -0.89
ATG4B-212ENST00000430617 TNPO3Q9Y5L0 923 aaKnown RBP9.52□□□□□ -0.89
ATG4B-212ENST00000430617 NKX2-6A6NCS4 301 aa9.51□□□□□ -0.89
ATG4B-212ENST00000430617 PABPN1LA6NDY0 278 aaKnown RBP9.51□□□□□ -0.89
ATG4B-212ENST00000430617 K7EPI3 171 aa9.51□□□□□ -0.89
ATG4B-212ENST00000430617 PPP6CO00743 305 aa9.51□□□□□ -0.89
ATG4B-212ENST00000430617 OR7A17O14581 309 aa9.51□□□□□ -0.89
ATG4B-212ENST00000430617 ZNF195O14628 629 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms