RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 FAM72CH0Y354 149 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 HLA-DQB2P05538 268 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 HSD17B7P56937 341 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 ISL1P61371 349 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 FAM72AQ5TYM5 149 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 FAM72DQ6L9T8 149 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 C3P1Q6ZMU1 363 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 FAM72BQ86X60 149 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 PDZD9Q8IXQ8 264 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 C2orf15Q8WU43 125 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 ATOH1Q92858 354 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 SMOQ99835 787 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 ADGRE3Q9BY15 652 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 GSDMCQ9BYG8 508 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 SERHLQ9NQF3 203 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 DOCK3Q8IZD9 2030 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 A0A1W2PP18 115 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 BNIP3LO60238 219 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 ALPPP05187 535 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 SYN1P17600 705 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 XPAP23025 273 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 NRIP1P48552 1158 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 FNTBP49356 437 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 PITX1P78337 314 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 ZNF177Q13360 481 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 KCNC3Q14003 757 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 LTB4RQ15722 352 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 ZRANB3Q5FWF4 1079 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 HECTD3Q5T447 861 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 PTRHD1Q6GMV3 140 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 DEF8Q6ZN54 512 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 USP45Q70EL2 814 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 DPPA2Q7Z7J5 298 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 C2CD4CQ8TF44 421 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 DNTTIP1Q9H147 329 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 TRPM7Q96QT4 1865 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 TTC24A2A3L6 582 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 POM121CA8CG34 1229 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 RGS14O43566 566 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 CXCL14O95715 111 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 HTR1AP08908 422 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 RD3LP0DJH9 198 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 PCMT1P22061 227 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 FAM124AQ86V42 546 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 CEP97Q8IW35 865 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 FBXO22Q8NEZ5 403 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 CREB3L1Q96BA8 519 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 DPY30Q9C005 99 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 MAP10Q9P2G4 905 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 SARDHQ9UL12 918 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 PKP3Q9Y446 797 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 SNX10Q9Y5X0 201 aa13.89□□□□□ -0.19
SYNGAP1-203ENST00000428982 LINC01387J3KSC0 135 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 LGALS8O00214 317 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 CDK14O94921 469 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 ALDH9A1P49189 494 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 TTPAP49638 278 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 NUDT6P53370 316 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 CXCR4P61073 352 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 SLC35F1Q5T1Q4 408 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 SLC13A3Q8WWT9 602 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 BARD1Q99728 777 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 BCL2L14Q9BZR8 327 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 SPHK1Q9NYA1 384 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 TAS2R3Q9NYW6 316 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 INVSQ9Y283 1065 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 BTRCQ9Y297 605 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 RHPN2P1A8MT19 583 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 TEX46H3BTG2 121 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 SIGLEC6O43699 453 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 MATN4O95460 622 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 HRGP04196 525 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 ZDHHC11BP0C7U3 371 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 SSTR4P31391 388 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 CLCN4P51793 760 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 MTPNP58546 118 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 MC2RQ01718 297 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 MZT2AQ6P582 158 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 PRSS55Q6UWB4 352 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 TMEM17Q86X19 198 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 GPR152Q8TDT2 470 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 LRRC46Q96FV0 321 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 LRCH3Q96II8 777 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 MED18Q9BUE0 208 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 ELF5Q9UKW6 265 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 ZNF490Q9ULM2 529 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 HPGDSO60760 199 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 LALBAP00709 142 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 CSF2RAP15509 400 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 GATMP50440 423 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 RNF4P78317 190 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 TAF10Q12962 218 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 SMN1Q16637 294 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 AAK1Q2M2I8 961 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 TTLL9Q3SXZ7 439 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 ZC3H12BQ5HYM0 836 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 RTP2Q5QGT7 225 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 LHX8Q68G74 356 aa13.88□□□□□ -0.19
SYNGAP1-203ENST00000428982 FAM198BQ6UWH4 519 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms