RNA–Protein interactions for RNA: ENST00000428895.1

BX088651.4-202, humanhuman

TSL 1 (best) BASIC

Gene BX088651.4, Length 1,479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BX088651.4-202ENST00000428895 CERS1P27544 350 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 SERPINB5P36952 375 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 FOLR3P41439 243 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 SSR2P43308 183 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 XCR1P46094 333 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 CUL3Q13618 768 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 ERV3-1Q14264 604 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 ABRAXAS2Q15018 415 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 AP5B1Q2VPB7 878 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 UBE3DQ7Z6J8 389 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 SLC39A7Q92504 469 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 TTC9Q92623 222 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 MIEF2Q96C03 454 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 PEX11GQ96HA9 241 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 QRFPRQ96P65 431 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 SERPINI1Q99574 410 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 TBCDQ9BTW9 1192 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 RBCK1Q9BYM8 510 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 SLC26A1Q9H2B4 701 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 ZNF395Q9H8N7 513 aaPredicted RBP12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 WDR54Q9H977 334 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 MKKSQ9NPJ1 570 aaPredicted RBP12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 PRDM7Q9NQW5 492 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 PSD3Q9NYI0 1048 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 SLC12A4Q9UP95 1085 aa12.2□□□□□ -0.46
BX088651.4-202ENST00000428895 TMEM233B4DJY2 109 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 NKX2-8O15522 239 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 KALRNO60229 2985 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 JRKO75564 520 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 HSPA4LO95757 839 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 PRKAR1AP10644 381 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 GRK2P25098 689 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 ATP5A1P25705 553 aaKnown RBP12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 MTTPP55157 894 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 ABCE1P61221 599 aaKnown RBP12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 PPP2R2AP63151 447 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 KLC1Q07866 573 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 GALNT1Q10472 559 aaPredicted RBP12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 STX3Q13277 289 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 RUNX2Q13950 521 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 SH2D4BQ5SQS7 431 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 MFSD4BQ5TF39 518 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 OR4C11Q6IEV9 310 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 ZNF793Q6ZN11 406 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 LAPTM4BQ86VI4 370 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 OR2Y1Q8NGV0 311 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 SERINC2Q96SA4 455 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 SPSB2Q99619 263 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 MRPL1Q9BYD6 325 aaKnown RBP12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 FAM117AQ9C073 453 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 BRF2Q9HAW0 419 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 PPT2Q9UMR5 302 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 TRAF6Q9Y4K3 522 aa12.19□□□□□ -0.46
BX088651.4-202ENST00000428895 PIEZO2Q9H5I5 2752 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 MED13Q9UHV7 2174 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 IGLV3-12A0A075B6K2 115 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 VSTM2BA6NLU5 285 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 ZNF891A8MT65 544 aaPredicted RBP12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 TMEM114B3SHH9 223 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 ATP8B1O43520 1251 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 CDC123O75794 336 aaPredicted RBP12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 BMP10O95393 424 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 CHEK2O96017 543 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 GBAP04062 536 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 CHN1P15882 459 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 HIST1H1TP22492 207 aaPredicted RBP12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 SLC1A6P48664 564 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 BST1Q10588 318 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 CSTF3Q12996 717 aaKnown RBP12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 IL10RAQ13651 578 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 MINDY4Q4G0A6 757 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 HSP90B2PQ58FF3 399 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 ATP1A1-AS1Q5TC04 95 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 ZC3H7AQ8IWR0 971 aaKnown RBP12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 CA13Q8N1Q1 262 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 ACOT4Q8N9L9 421 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 CRB3Q9BUF7 120 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 ACPTQ9BZG2 426 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 TGIF2Q9GZN2 237 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 ROGDIQ9GZN7 287 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 C20orf27Q9GZN8 174 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 C14orf105Q9NVL8 296 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 NMRK1Q9NWW6 199 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 VPS29Q9UBQ0 182 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 ZDHHC2Q9UIJ5 367 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 NXT1Q9UKK6 140 aaKnown RBP12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 BAHCC1Q9P281 2608 aa12.18□□□□□ -0.46
BX088651.4-202ENST00000428895 CDC14CA4D256 554 aa12.17□□□□□ -0.46
BX088651.4-202ENST00000428895 OR2W5A6NFC9 320 aa12.17□□□□□ -0.46
BX088651.4-202ENST00000428895 PSMD12O00232 456 aaPredicted RBP12.17□□□□□ -0.46
BX088651.4-202ENST00000428895 DYNC1I1O14576 645 aa12.17□□□□□ -0.46
BX088651.4-202ENST00000428895 SEMA3DO95025 777 aa12.17□□□□□ -0.46
BX088651.4-202ENST00000428895 ITGB2P05107 769 aa12.17□□□□□ -0.46
BX088651.4-202ENST00000428895 HEXBP07686 556 aa12.17□□□□□ -0.46
BX088651.4-202ENST00000428895 UMODP07911 640 aa12.17□□□□□ -0.46
BX088651.4-202ENST00000428895 FGF4P08620 206 aa12.17□□□□□ -0.46
BX088651.4-202ENST00000428895 FURINP09958 794 aa12.17□□□□□ -0.46
BX088651.4-202ENST00000428895 RNH1P13489 461 aaKnown RBP12.17□□□□□ -0.46
BX088651.4-202ENST00000428895 HSD3B1P14060 373 aa12.17□□□□□ -0.46
BX088651.4-202ENST00000428895 NR1D1P20393 614 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms