RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 GALR3O60755 368 aaPredicted RBP7.02□□□□□ -1.29
LINC01049-201ENST00000426840 ZWINTO95229 277 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 NSA2O95478 260 aaKnown RBP7.02□□□□□ -1.29
LINC01049-201ENST00000426840 MLYCDO95822 493 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 B3GALT4O96024 378 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 OTCP00480 354 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 TGFB1P01137 390 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 RAB40ALP0C0E4 278 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 SLC35G6P0C7Q6 338 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 LIFP15018 202 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 ALOX12P18054 663 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 IL1RNP18510 177 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 AGXTP21549 392 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 HNRNPH1P31943 449 aaKnown RBP7.02□□□□□ -1.29
LINC01049-201ENST00000426840 ARRB2P32121 409 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 DLSTP36957 453 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 PIK3CBP42338 1070 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 PKNOX1P55347 436 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 RAB8AP61006 207 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 NAA20P61599 178 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 TLE3Q04726 772 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 RGS1Q08116 209 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 DNASE1L3Q13609 305 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 RBBP7Q16576 425 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 TOR1AIP1Q5JTV8 583 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 DEPDC1Q5TB30 811 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 MLIPQ5VWP3 458 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 FAM198BQ6UWH4 519 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 FRMD7Q6ZUT3 714 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 GPRIN3Q6ZVF9 776 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 VASH2Q86V25 355 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 PDSS2Q86YH6 399 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 MYLK4Q86YV6 388 aaPredicted RBP7.02□□□□□ -1.29
LINC01049-201ENST00000426840 NUDCD3Q8IVD9 361 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 METTL27Q8N6F8 245 aaPredicted RBP7.02□□□□□ -1.29
LINC01049-201ENST00000426840 AMER3Q8N944 861 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 OR9A4Q8NGU2 314 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 HUS1BQ8NHY5 278 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 AGAP11Q8TF27 550 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 MTFMTQ96DP5 389 aaKnown RBP7.02□□□□□ -1.29
LINC01049-201ENST00000426840 MS4A6EQ96DS6 147 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 CMTM7Q96FZ5 175 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 CNDP1Q96KN2 507 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 PKNOX2Q96KN3 472 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 QRFPRQ96P65 431 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 CCNL2Q96S94 520 aaPredicted RBP7.02□□□□□ -1.29
LINC01049-201ENST00000426840 ZNF382Q96SR6 550 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 MS4A8Q9BY19 250 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 SLC26A1Q9H2B4 701 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 TNFRSF12AQ9NP84 129 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 PRDM7Q9NQW5 492 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 FARSBQ9NSD9 589 aaKnown RBP7.02□□□□□ -1.29
LINC01049-201ENST00000426840 ADGRE2Q9UHX3 823 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 PCDHGA6Q9Y5G7 932 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 MAU2Q9Y6X3 613 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 WDFY3Q8IZQ1 3526 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 IGF2RP11717 2491 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 CHD8Q9HCK8 2581 aa7.02□□□□□ -1.29
LINC01049-201ENST00000426840 IGLV3-12A0A075B6K2 115 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 WDR91A4D1P6 747 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 URADA6NGE7 173 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 VSTM2BA6NLU5 285 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 MAGEB17A8MXT2 336 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 C21orf140B9A014 251 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 SGK494L7N484 410 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 MANBAO00462 879 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 FFAR3O14843 346 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 GPR42O15529 346 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 NPHS1O60500 1241 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 KLF7O75840 302 aaPredicted RBP7.01□□□□□ -1.29
LINC01049-201ENST00000426840 KLHL18O94889 574 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 ETHE1O95571 254 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 ESRRBO95718 433 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 RECKO95980 971 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 PDYNP01213 254 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 CHRNGP07510 517 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 FGF4P08620 206 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 ZNF888P0CJ79 500 aaPredicted RBP7.01□□□□□ -1.29
LINC01049-201ENST00000426840 PIM1P11309 404 aaPredicted RBP7.01□□□□□ -1.29
LINC01049-201ENST00000426840 PCNAP12004 261 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 PTX3P26022 381 aaPredicted RBP7.01□□□□□ -1.29
LINC01049-201ENST00000426840 PTPN4P29074 926 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 SERPINB3P29508 390 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 SERPINB1P30740 379 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 AVPR1BP47901 424 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 HTR6P50406 440 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 FOXA1P55317 472 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 FOXL2P58012 376 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 STXBP1P61764 594 aaKnown RBP7.01□□□□□ -1.29
LINC01049-201ENST00000426840 RPS13P62277 151 aaKnown RBP7.01□□□□□ -1.29
LINC01049-201ENST00000426840 RPS15P62841 145 aaKnown RBP7.01□□□□□ -1.29
LINC01049-201ENST00000426840 BTN3A2P78410 334 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 MAT1AQ00266 395 aaKnown RBP7.01□□□□□ -1.29
LINC01049-201ENST00000426840 C19orf57Q0VDD7 668 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 GALNT1Q10472 559 aaPredicted RBP7.01□□□□□ -1.29
LINC01049-201ENST00000426840 ASPHQ12797 758 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 LCP2Q13094 533 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 DDX39BQ13838 428 aaKnown RBP7.01□□□□□ -1.29
LINC01049-201ENST00000426840 RUNX2Q13950 521 aa7.01□□□□□ -1.29
LINC01049-201ENST00000426840 SLC9A5Q14940 896 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms