RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 SESN2P58004 480 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-206ENST00000426196 CRADDP78560 199 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 FOXO1Q12778 655 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 ZNF750Q32MQ0 723 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 XKR6Q5GH73 641 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 SEM1Q6ZVN7 128 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 UBE2R2Q712K3 238 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-206ENST00000426196 YTHDF3Q7Z739 585 aaKnown RBP13.12□□□□□ -0.31
HDAC6-206ENST00000426196 TBC1D19Q8N5T2 526 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 PRELID2Q8N945 189 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 GOLM1Q8NBJ4 401 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 NAXEQ8NCW5 288 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 PIGTQ969N2 578 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 SGCZQ96LD1 299 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 SECISBP2Q96T21 854 aaKnown RBP13.12□□□□□ -0.31
HDAC6-206ENST00000426196 PIP5K1AQ99755 562 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 IL22Q9GZX6 179 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 LIN28AQ9H9Z2 209 aaKnown RBP13.12□□□□□ -0.31
HDAC6-206ENST00000426196 RAB6BQ9NRW1 208 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 PPIEQ9UNP9 301 aaKnown RBP13.12□□□□□ -0.31
HDAC6-206ENST00000426196 VPS9D1Q9Y2B5 631 aa13.12□□□□□ -0.31
HDAC6-206ENST00000426196 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.12□□□□□ -0.31
HDAC6-206ENST00000426196 WWP2O00308 870 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 OR1F1O43749 312 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 VAPBO95292 243 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 IFNB1P01574 187 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 IL2RAP01589 272 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 ENO3P13929 434 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-206ENST00000426196 CCND1P24385 295 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 NMBRP28336 390 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 STIP1P31948 543 aaKnown RBP13.11□□□□□ -0.31
HDAC6-206ENST00000426196 CEACAM8P31997 349 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-206ENST00000426196 DNASE1L1P49184 302 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 CLCN7P51798 805 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 CUL1Q13616 776 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 PHKG1Q16816 387 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 TNIP2Q8NFZ5 429 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 SMPDL3BQ92485 455 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 ALG3Q92685 438 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 ALKBH8Q96BT7 664 aaKnown RBP13.11□□□□□ -0.31
HDAC6-206ENST00000426196 SCYL1Q96KG9 808 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 CAPZA3Q96KX2 299 aa13.11□□□□□ -0.31
HDAC6-206ENST00000426196 TUBA8Q9NY65 449 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-206ENST00000426196 CUBNO60494 3623 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 URADA6NGE7 173 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 TRIM64A6NGJ6 449 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 TRIM64BA6NI03 449 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 EEF1E1-BLOC1S5C9J1V9 151 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 GOLGA8KD6RF30 607 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 GOLGA8TH3BQL2 631 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 EEF1E1O43324 174 aaKnown RBP13.1□□□□□ -0.31
HDAC6-206ENST00000426196 CRLF1O75462 422 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 OGNP20774 298 aaKnown RBP13.1□□□□□ -0.31
HDAC6-206ENST00000426196 ARNTP27540 789 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 TIMP3P35625 211 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 CCR8P51685 355 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 GPR143P51810 404 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 CBLBQ13191 982 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 ACSF3Q4G176 576 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-206ENST00000426196 LCTLQ6UWM7 567 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 HSDL2Q6YN16 418 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 LACC1Q8IV20 430 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 LIX1Q8N485 282 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 CALR3Q96L12 384 aaKnown RBP13.1□□□□□ -0.31
HDAC6-206ENST00000426196 SLC30A3Q99726 388 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 HAUS8Q9BT25 410 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 ADAP2Q9NPF8 381 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 KLHL42Q9P2K6 505 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 TFR2Q9UP52 801 aa13.1□□□□□ -0.31
HDAC6-206ENST00000426196 EIF3LQ9Y262 564 aaKnown RBP13.1□□□□□ -0.31
HDAC6-206ENST00000426196 ABCA1O95477 2261 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 A0A1W2PPR1 153 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 TRBC2A0A5B9 178 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 AHRRA9YTQ3 701 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 CBFA2T2O43439 604 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 EPPINO95925 133 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 NAP1L1P55209 391 aaKnown RBP13.09□□□□□ -0.31
HDAC6-206ENST00000426196 KLF1Q13351 362 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-206ENST00000426196 NAE1Q13564 534 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 SIX1Q15475 284 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-206ENST00000426196 BBS9Q3SYG4 887 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 CAVIN1Q6NZI2 390 aaKnown RBP13.09□□□□□ -0.31
HDAC6-206ENST00000426196 STRA8Q7Z7C7 330 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 PHC2Q8IXK0 858 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 TMEM132CQ8N3T6 1108 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 ABHD11Q8NFV4 315 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 GIMAP7Q8NHV1 300 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 NT5CQ8TCD5 201 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 UTP15Q8TED0 518 aaKnown RBP13.09□□□□□ -0.31
HDAC6-206ENST00000426196 HSPBAP1Q96EW2 488 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 DACH2Q96NX9 599 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 CCDC68Q9H2F9 335 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 ZNF703Q9H7S9 590 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-206ENST00000426196 TRMT1Q9NXH9 659 aaKnown RBP13.09□□□□□ -0.31
HDAC6-206ENST00000426196 BFARQ9NZS9 450 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 BOKQ9UMX3 212 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-206ENST00000426196 ZNF148Q9UQR1 794 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 ATG4BQ9Y4P1 393 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 PCDHA13Q9Y5I0 950 aa13.09□□□□□ -0.31
HDAC6-206ENST00000426196 ROS1P08922 2347 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms