RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 KLK1P06870 262 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 FURINP09958 794 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ZNF888P0CJ79 500 aaPredicted RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ST6GAL1P15907 406 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 DDCP20711 480 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 HIST1H1TP22492 207 aaPredicted RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 TPP2P29144 1249 aaPredicted RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 AVPR2P30518 371 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 BSGP35613 385 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ZFP36L2P47974 494 aaKnown RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 TRPC1P48995 793 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ALDH9A1P49189 494 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 DUSP3P51452 185 aaPredicted RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 PLA2G16P53816 162 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 GFERP55789 205 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 EEFSECP57772 596 aaKnown RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 PPP1CAP62136 330 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 DAB2P98082 770 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 BNC1Q01954 994 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 TNFRSF17Q02223 184 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 C2orf80Q0P641 193 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 PDE7AQ13946 482 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 SLC9A5Q14940 896 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 KPNB1Q14974 876 aaKnown RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ZIC1Q15915 447 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 SNCBQ16143 134 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 NDUFA9Q16795 377 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 HLA-BQ31612 363 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 PIGGQ5H8A4 983 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 LRIF1Q5T3J3 769 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 TMTC4Q5T4D3 741 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 FCRL6Q6DN72 434 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 LAIR1Q6GTX8 287 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 OR4C11Q6IEV9 310 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 OR4F3Q6IEY1 312 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 OR52E8Q6IFG1 317 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 FAM71E1Q6IPT2 247 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 MRPL14Q6P1L8 145 aaKnown RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ABHD17CQ6PCB6 329 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 SLC23A3Q6PIS1 610 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 OGFOD3Q6PK18 319 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 FAM92BQ6ZTR7 304 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 PRSS42Q7Z5A4 293 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 VN1R4Q7Z5H5 301 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 SPRED1Q7Z699 444 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ANKRD46Q86W74 232 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 RIMKLAQ8IXN7 391 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 KIAA2013Q8IYS2 634 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 OR7A2PQ8NGA2 310 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 OR4A15Q8NGL6 344 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ADAMTS18Q8TE60 1221 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 SAP25Q8TEE9 199 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 NCLNQ969V3 563 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 MS4A6EQ96DS6 147 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ASB9Q96DX5 294 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 TCTN2Q96GX1 697 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 CLPTM1LQ96KA5 538 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 LRGUKQ96M69 825 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 PPM1MQ96MI6 270 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 CCDC115Q96NT0 180 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 PANX1Q96RD7 426 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 F2RL3Q96RI0 385 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 SERINC2Q96SA4 455 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 CGREF1Q99674 301 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 DPYSL5Q9BPU6 564 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 KCTD14Q9BQ13 255 aaPredicted RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 CPPED1Q9BRF8 314 aaPredicted RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 GTPBP2Q9BX10 602 aaKnown RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 SORBS1Q9BX66 1292 aaKnown RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ZNF717Q9BY31 904 aaPredicted RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 RAB33BQ9H082 229 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 KLHL25Q9H0H3 589 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 RASSF4Q9H2L5 321 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 RAD21L1Q9H4I0 556 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ALG2Q9H553 416 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 CAAP1Q9H8G2 361 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 PDE7BQ9NP56 450 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 EHD3Q9NZN3 535 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 SH3BP4Q9P0V3 963 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 LRIT1Q9P2V4 623 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ZNF282Q9UDV7 671 aaPredicted RBP5.67□□□□□ -1.5
HMGB3-202ENST00000419110 BAIAP2L1Q9UHR4 511 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 ATP6V1HQ9UI12 483 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 BTNL2Q9UIR0 455 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 MAGEL2Q9UJ55 1249 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 PADI4Q9UM07 663 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 VPS4AQ9UN37 437 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 PCDHGB4Q9UN71 923 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 KLHL20Q9Y2M5 609 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 PCDHGA7Q9Y5G6 932 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 SNX13Q9Y5W8 968 aa5.67□□□□□ -1.5
HMGB3-202ENST00000419110 C1orf226A1L170 272 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 FAM86C2PA6NEL3 165 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 EVPLLA8MZ36 301 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 FAM220BPB1ANY3 271 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 H0YGG7 62 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 NME4O00746 187 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 KHNYNO15037 678 aaKnown RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 LCMT2O60294 686 aaKnown RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 PCDHGA12O60330 932 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms