RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 AP3S1Q92572 193 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 EDEM1Q92611 657 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 TCEAL3Q969E4 200 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 PABPC5Q96DU9 382 aaKnown RBP6.14□□□□□ -1.43
CCNT1-202ENST00000417344 SCMH1Q96GD3 660 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 MASTLQ96GX5 879 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 ZNF251Q9BRH9 671 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 MRPL45Q9BRJ2 306 aaKnown RBP6.14□□□□□ -1.43
CCNT1-202ENST00000417344 CCM2Q9BSQ5 444 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 H2AFJQ9BTM1 129 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 PDGFDQ9GZP0 370 aaPredicted RBP6.14□□□□□ -1.43
CCNT1-202ENST00000417344 DEFB129Q9H1M3 183 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 PORCNQ9H237 461 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 ACTL8Q9H568 366 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 REEP1Q9H902 201 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 HEBP1Q9NRV9 189 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 TREX1Q9NSU2 369 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 DNAJC11Q9NVH1 559 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 C1orf109Q9NX04 203 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 ZNF226Q9NYT6 803 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 SLC25A37Q9NYZ2 338 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 GPN3Q9UHW5 284 aaPredicted RBP6.14□□□□□ -1.43
CCNT1-202ENST00000417344 SSR3Q9UNL2 185 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 PPIEQ9UNP9 301 aaKnown RBP6.14□□□□□ -1.43
CCNT1-202ENST00000417344 ERVK-19Q9WJR5 959 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 RPH3AQ9Y2J0 694 aaPredicted RBP6.14□□□□□ -1.43
CCNT1-202ENST00000417344 ASB4Q9Y574 426 aa6.14□□□□□ -1.43
CCNT1-202ENST00000417344 CFAP20Q9Y6A4 193 aaKnown RBP6.14□□□□□ -1.43
CCNT1-202ENST00000417344 DICER1Q9UPY3 1922 aaKnown RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 LCHNA4D1U4 455 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 PMS2P1A4D2B8 440 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 RRN3P2A6NIE6 340 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 PER2O15055 1255 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 DCLK1O15075 740 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 PSMD3O43242 534 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 CCNDBP1O95273 360 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 SMIM6P0DI80 62 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 HAPLN1P10915 354 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 MTHFD2P13995 350 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 C4BPBP20851 252 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 SDC2P34741 201 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 CDKN2DP55273 166 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 SNX16P57768 344 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 RPS7P62081 194 aaKnown RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 IL18Q14116 193 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 FGL2Q14314 439 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 KIAA0040Q15053 153 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 P2RY14Q15391 338 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 MAPKAPK3Q16644 382 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 AP5B1Q2VPB7 878 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 HFEQ30201 348 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 SPDYE7PQ495Y7 208 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 ATG9BQ674R7 924 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 ZNF57Q68EA5 555 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 PDE12Q6L8Q7 609 aaKnown RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 SWSAP1Q6NVH7 229 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 CNIH2Q6PI25 160 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 METAP1DQ6UB28 335 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 RAB11FIP2Q7L804 512 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 CALHM3Q86XJ0 350 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 MCATQ8IVS2 390 aaKnown RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 RGL4Q8IZJ4 473 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 UXS1Q8NBZ7 420 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 CHTF18Q8WVB6 975 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 LRRC46Q96FV0 321 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 OTUB1Q96FW1 271 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 MRPL48Q96GC5 212 aaKnown RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 SLC38A3Q99624 504 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 TBL1YQ9BQ87 522 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 SOSTQ9BQB4 213 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 APOL5Q9BWW9 433 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 ARHGAP39Q9C0H5 1083 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 CNOT2Q9NZN8 540 aaKnown RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 MPP6Q9NZW5 540 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 MALT1Q9UDY8 824 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 SIX4Q9UIU6 781 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 DERAQ9Y315 318 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 ZNF451Q9Y4E5 1061 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 COL11A2P13942 1736 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 MEIKINA0A087WXM9 373 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 A0A0G2JPF8 293 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 DDTLA6NHG4 134 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 HNRNPCL3B7ZW38 293 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 SLC7A4O43246 635 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 EIF3GO75821 320 aaKnown RBP eCLIP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 HTR3BO95264 441 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 MLYCDO95822 493 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 ESR1P03372 595 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 ACAA1P09110 424 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 HNRNPCL4P0DMR1 293 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 ERCC2P18074 760 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 RHCEP18577 417 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 PTBP1P26599 531 aaKnown RBP eCLIP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 PRDX3P30048 256 aaKnown RBP6.13□□□□□ -1.43
CCNT1-202ENST00000417344 AKT1P31749 480 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 ARL2P36404 184 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 MATKP42679 507 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 GZMMP51124 257 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 ITGA1P56199 1179 aa6.13□□□□□ -1.43
CCNT1-202ENST00000417344 VSX2P58304 361 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms