RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 F2RL3Q96RI0 385 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 SLC29A3Q9BZD2 475 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 AICDAQ9GZX7 198 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 EPB41L4BQ9H329 900 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 NOL11Q9H8H0 719 aaKnown RBP13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 ANKZF1Q9H8Y5 726 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 LYRM4Q9HD34 91 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 MMP25Q9NPA2 562 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 DMRT3Q9NQL9 472 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 ABI3Q9P2A4 366 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 TBK1Q9UHD2 729 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 DCDC2Q9UHG0 476 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 PCTPQ9UKL6 214 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 DAPP1Q9UN19 280 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 STK38LQ9Y2H1 464 aa13.35□□□□□ -0.27
SLC13A3-205ENST00000417157 IGHV3-20A0A0C4DH32 117 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 TCRBV16S1A1N1A0A5B0 115 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 A8MT66 165 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 CDH16O75309 829 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 GLRA3O75311 464 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 SCELO95171 688 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 TBX6O95947 436 aaPredicted RBP13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 OTCP00480 354 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 TGFB1P01137 390 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 RPS17P08708 135 aaKnown RBP13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 ITGAMP11215 1152 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 KRT15P19012 456 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 HIST1H1TP22492 207 aaPredicted RBP13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 PTX3P26022 381 aaPredicted RBP13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 MLLT10P55197 1068 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 LIM2P55344 173 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 RASA2Q15283 850 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 TERF2Q15554 542 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 CPSF6Q16630 551 aaKnown RBP eCLIP13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 GGTA1PQ4G0N0 100 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 COLEC12Q5KU26 742 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 DEPDC1Q5TB30 811 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 TTC19Q6DKK2 380 aaPredicted RBP13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 TDRPQ86YL5 185 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 SLC22A9Q8IVM8 553 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 SLC5A8Q8N695 610 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 SIRT6Q8N6T7 355 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 DNAJB14Q8TBM8 379 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 MIB2Q96AX9 1013 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 RGMAQ96B86 450 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 CNDP1Q96KN2 507 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 NTMT1Q9BV86 223 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 C1QTNF3Q9BXJ4 246 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 RNF32Q9H0A6 362 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 CLMPQ9H6B4 373 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 KCNK13Q9HB14 408 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 PRTFDC1Q9NRG1 225 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 MS4A12Q9NXJ0 267 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 PSD3Q9NYI0 1048 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 PPT2Q9UMR5 302 aa13.34□□□□□ -0.27
SLC13A3-205ENST00000417157 IGKV3D-11A0A0A0MRZ8 115 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 OR2W5A6NFC9 320 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 LRRC14BA6NHZ5 514 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 ESPNB1AK53 854 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 FOXE1O00358 373 aaPredicted RBP13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 DNAJB6O75190 326 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 VPS4BO75351 444 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 MAOAP21397 527 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 ATP5F1P24539 256 aaPredicted RBP13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 CD97P48960 835 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 SLC26A5P58743 744 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 HERVK_113P63132 956 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 IFT88Q13099 833 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 SLC13A2Q13183 592 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 CUL3Q13618 768 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 RUNX2Q13950 521 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 ZNF169Q14929 603 aaPredicted RBP13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 ZRSR2Q15696 482 aaKnown RBP13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 INPP5JQ15735 1006 aaPredicted RBP13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 OR4C11Q6IEV9 310 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 EMBQ6PCB8 327 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 SCUBE1Q8IWY4 988 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 CYP4X1Q8N118 509 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 LGI4Q8N135 537 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 ACOT4Q8N9L9 421 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 FAM47BQ8NA70 645 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 Q8NA96 180 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 SUN3Q8TAQ9 357 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 PSMF1Q92530 271 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 CCDC126Q96EE4 140 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 ZNF354BQ96LW1 612 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 MTERF1Q99551 399 aaKnown RBP13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 ERVK-6Q9BXR3 956 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 ZBTB20Q9HC78 741 aaPredicted RBP13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 SEMA4BQ9NPR2 832 aaPredicted RBP13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 PRDM7Q9NQW5 492 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 TMEM216Q9P0N5 145 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 LUZP4Q9P127 313 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 PHF11Q9UIL8 331 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 VPS4AQ9UN37 437 aa13.33□□□□□ -0.28
SLC13A3-205ENST00000417157 CCDC88CQ9P219 2028 aa13.32□□□□□ -0.28
SLC13A3-205ENST00000417157 SAGE2PA6NJ88 616 aa13.32□□□□□ -0.28
SLC13A3-205ENST00000417157 GOLGA8RI6L899 631 aa13.32□□□□□ -0.28
SLC13A3-205ENST00000417157 CDK2AP1O14519 115 aa13.32□□□□□ -0.28
SLC13A3-205ENST00000417157 OR7A17O14581 309 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms