RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 PGM2Q96G03 612 aa0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 RBM41Q96IZ5 413 aaKnown RBP0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 PCDHB18PQ96TA0 734 aa0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 SEC62Q99442 399 aaKnown RBP0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 FEVQ99581 238 aa0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 NMUR2Q9GZQ4 415 aa0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 DNAJC4Q9NNZ3 241 aa0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 EXOC1Q9NV70 894 aa0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 SEPT11Q9NVA2 429 aaKnown RBP0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 ZNF446Q9NWS9 450 aa0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 RCOR3Q9P2K3 495 aaPredicted RBP0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 SUCLA2Q9P2R7 463 aaPredicted RBP0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 ORC3Q9UBD5 711 aaPredicted RBP0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 RNF24Q9Y225 148 aa0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 TSPOAP1O95153 1857 aa0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 CHD4Q14839 1912 aa0.6□□□□□ -2.31
GTF3C3-203ENST00000416690 ARHGAP21Q5T5U3 1957 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 VIRMAQ69YN4 1812 aaKnown RBP0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 SLIT3O75094 1523 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 SUPT6HQ7KZ85 1726 aaKnown RBP0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 A0A1B0GVC2 190 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 A0A1W2PPM1 405 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 CCDC189A1A4V9 331 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 TRIM77I1YAP6 450 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 AP3D1O14617 1153 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 MCF2LO15068 1137 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 KIF5CO60282 957 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 RECQL5O94762 991 aaPredicted RBP0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 DUSP14O95147 198 aaKnown RBP0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 IGLV3-19P01714 112 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 MT-ND2P03891 347 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 SLC35E2P0CK97 266 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 GOT1P17174 413 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 FUT3P21217 361 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 CTNNA2P26232 953 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 HADHAP40939 763 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 SETQ01105 290 aaPredicted RBP0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 CREB5Q02930 508 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 CACNG1Q06432 222 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 SF3A2Q15428 464 aaKnown RBP0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 PRR4Q16378 134 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 SNAPC1Q16533 368 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 CCDC14Q49A88 953 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 LRRC37A5PQ49AS3 106 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 ZNF658Q5TYW1 1059 aaPredicted RBP0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 ZSCAN25Q6NSZ9 544 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 TTC27Q6P3X3 843 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 TRMT11Q7Z4G4 463 aaKnown RBP0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 ADAMTSL2Q86TH1 951 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 SYVN1Q86TM6 617 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 TMEM61Q8N0U2 210 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 PRSS35Q8N3Z0 413 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 SAMD12Q8N8I0 201 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 DEDD2Q8WXF8 326 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 CPNE1Q99829 537 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 ZNF670Q9BS34 389 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 CCSER1Q9C0I3 900 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 GOLPH3LQ9H4A5 285 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 NMUR1Q9HB89 426 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 HPS4Q9NQG7 708 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 SH3GLB2Q9NR46 395 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 INPP5EQ9NRR6 644 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 IRAK4Q9NWZ3 460 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 CRNNQ9UBG3 495 aaPredicted RBP0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 SATB2Q9UPW6 733 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 PSG11Q9UQ72 335 aa0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 PTRH2Q9Y3E5 179 aaKnown RBP0.59□□□□□ -2.31
GTF3C3-203ENST00000416690 CCDC180Q9P1Z9 1646 aa0.59□□□□□ -2.32
GTF3C3-203ENST00000416690 IGLV4-60A0A075B6I1 120 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 PTGES3LE9PB15 166 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 H3BMM5 538 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 TOXO94900 526 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 STBD1O95210 358 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 PRAMEF12O95522 483 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 OR9G9P0C7N8 305 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 PSMB10P40306 273 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 ASAH1Q13510 395 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 LY6EQ16553 131 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 RBBP7Q16576 425 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 C15orf59Q2T9L4 293 aaPredicted RBP0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 CNPY1Q3B7I2 92 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 C14orf28Q4W4Y0 310 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 NHSL2Q5HYW2 709 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 HAUS3Q68CZ6 603 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 FAAH2Q6GMR7 532 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 NAA16Q6N069 864 aaPredicted RBP0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 NEPROQ6NW34 567 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 ANKRD33Q7Z3H0 272 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 PIGWQ7Z7B1 504 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 PRUNE1Q86TP1 453 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 CPXCR1Q8N123 301 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 TTC39CQ8N584 583 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 CFAP61Q8NHU2 1237 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 LIPHQ8WWY8 451 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 MPP4Q96JB8 637 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 OR5M11Q96RB7 305 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 CDX2Q99626 313 aaPredicted RBP0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 KIR2DL4Q99706 377 aa0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 JPH2Q9BR39 696 aaPredicted RBP0.58□□□□□ -2.32
GTF3C3-203ENST00000416690 ZNF702PQ9H963 129 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms