RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 SKP1P63208 163 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 ERV3-1Q14264 604 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 CA13Q8N1Q1 262 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 ARFGAP2Q8N6H7 521 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 OR2T11Q8NH01 316 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 STT3BQ8TCJ2 826 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 KIAA1143Q96AT1 154 aaPredicted RBP28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 FKBP10Q96AY3 582 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 SOX17Q9H6I2 414 aaPredicted RBP28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 CCL27Q9Y4X3 112 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 A0A088AWK7 358 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 C21orf140B9A014 251 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 KLF7O75840 302 aaPredicted RBP28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 SEMA3DO95025 777 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 SNUPNO95149 360 aaKnown RBP28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 RAB40ALP0C0E4 278 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 ZNF10P21506 573 aaPredicted RBP28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 XCR1P46094 333 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 RPS15P62841 145 aaKnown RBP28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 IMPG1Q17R60 797 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 NIPAL1Q6NVV3 410 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 METTL4Q8N3J2 472 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 KDF1Q8NAX2 398 aaPredicted RBP28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 APIPQ96GX9 242 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 ACTL8Q9H568 366 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 SLCO1B3Q9NPD5 702 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 MARCOQ9UEW3 520 aaPredicted RBP28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 ACACBO00763 2458 aa28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 TMEM8BA6NDV4 472 aa28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 RRP8O43159 456 aaKnown RBP28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 ALBP02768 609 aa28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 PTPN4P29074 926 aa28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 PDCD2Q16342 344 aaPredicted RBP28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 SPDYAQ5MJ70 313 aa28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 Q6ZSR9 355 aa28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 LAPTM4BQ86VI4 370 aa28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 ZC3H7AQ8IWR0 971 aaKnown RBP28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 C1orf52Q8N6N3 182 aaKnown RBP28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 SLC26A1Q9H2B4 701 aa28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 MKKSQ9NPJ1 570 aaPredicted RBP28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 NMRK1Q9NWW6 199 aa28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 PTRH2Q9Y3E5 179 aaKnown RBP28.9■■■□□ 2.22
CSNK1E-206ENST00000413574 NUP210LQ5VU65 1888 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 IGLV3-12A0A075B6K2 115 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 KLK1P06870 262 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 KITP10721 976 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 ITPKBP27987 946 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 OCA2Q04671 838 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 SLAMF1Q13291 335 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 COMMD6Q7Z4G1 85 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 PPP1R36Q96LQ0 422 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 C3orf30Q96M34 536 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 MAGEB18Q96M61 343 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 SPSB2Q99619 263 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 GPR87Q9BY21 358 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 ROGDIQ9GZN7 287 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 DDX31Q9H8H2 851 aaKnown RBP28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 TCFL5Q9UL49 500 aa28.89■■■□□ 2.22
CSNK1E-206ENST00000413574 OR2W5A6NFC9 320 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 VSTM2BA6NLU5 285 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 FAM227AF5H4B4 570 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 EFSO43281 561 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 SCELO95171 688 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 ZGLP1P0C6A0 271 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 LIM2P55344 173 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 NUDT13Q86X67 352 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 CHTF18Q8WVB6 975 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 MIEF2Q96C03 454 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 MAPKAP1Q9BPZ7 522 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 AHSPQ9NZD4 102 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 KCND3Q9UK17 655 aa28.88■■■□□ 2.21
CSNK1E-206ENST00000413574 TPRP12270 2363 aaKnown RBP28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 SLC28A1O00337 649 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 TMPRSS11DO60235 418 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 BMP10O95393 424 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 TSFMP43897 325 aaKnown RBP28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 ARFIP1P53367 373 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 RNF165Q6ZSG1 346 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 CNTNAP3BQ96NU0 1288 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 CCNL2Q96S94 520 aaPredicted RBP28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 NPLQ9BXD5 320 aaPredicted RBP28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 CNTNAP3Q9BZ76 1288 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 GIMAP2Q9UG22 337 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 FBXW2Q9UKT8 454 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 DAPP1Q9UN19 280 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 SSUH2Q9Y2M2 353 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 PCDHGA6Q9Y5G7 932 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 LOC400499M0QZD8 3231 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 A0A0A6YYD5 115 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 ATP6AP2A0A1C7CYW4 349 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 ATP6AP2O75787 350 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 CDC123O75794 336 aaPredicted RBP28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 TPP2P29144 1249 aaPredicted RBP28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 EFNA3P52797 238 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 KLC1Q07866 573 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 FAM76AQ8TAV0 307 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 TGIF2Q9GZN2 237 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 WDR54Q9H977 334 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 KCMF1Q9P0J7 381 aa28.87■■■□□ 2.21
CSNK1E-206ENST00000413574 RGS14O43566 566 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms