RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ZNF770Q6IQ21 691 aaPredicted RBP16.88■□□□□ 0.29
SDCBP-202ENST00000413219 RGMBQ6NW40 437 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 ZNF852Q6ZMS4 543 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 LAS2Q8IYD9 372 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 PCSK9Q8NBP7 692 aaKnown RBP16.88■□□□□ 0.29
SDCBP-202ENST00000413219 OR2AP1Q8NGE2 309 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 TMEM246Q9BRR3 403 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 TMEM175Q9BSA9 504 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 MND1Q9BWT6 205 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 TMEM245Q9H330 911 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 NMNAT1Q9HAN9 279 aaPredicted RBP16.88■□□□□ 0.29
SDCBP-202ENST00000413219 MBD1Q9UIS9 605 aaPredicted RBP16.88■□□□□ 0.29
SDCBP-202ENST00000413219 KCND3Q9UK17 655 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 TMPRSS11EQ9UL52 423 aa16.88■□□□□ 0.29
SDCBP-202ENST00000413219 EXO1Q9UQ84 846 aaKnown RBP16.88■□□□□ 0.29
SDCBP-202ENST00000413219 GNG14A0A1W2PPG7 69 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 HYKKA2RU49 373 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 KRT87PA6NCN2 255 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 FAM25AB3EWG3 89 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 FAM25CB3EWG5 89 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 FAM25GB3EWG6 89 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 ALX3O95076 343 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 LGI1O95970 557 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 ADAP00813 363 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 RPL3P39023 403 aaKnown RBP16.87■□□□□ 0.29
SDCBP-202ENST00000413219 SPHARQ15513 63 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 IL17RCQ8NAC3 791 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 GRPEL2Q8TAA5 225 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 ASZ1Q8WWH4 475 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 SLC7A6Q92536 515 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 TMEM80Q96HE8 168 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 RNF170Q96K19 258 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 BRD9Q9H8M2 597 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 ABCB8Q9NUT2 735 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 NDUFB11Q9NX14 153 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 SNX7Q9UNH6 387 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 PCDHB7Q9Y5E2 793 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 PRAMEF33A0A0G2JMD5 474 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 A0A1W2PQ09 198 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 TLR4O00206 839 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 GREM1O60565 184 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 PRAMEF10O60809 474 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 ENTPD6O75354 484 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 PSIP1O75475 530 aaKnown RBP16.87■□□□□ 0.29
SDCBP-202ENST00000413219 SLCO2B1O94956 709 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 GASTP01350 101 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 GALTP07902 379 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 YES1P07947 543 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 ARAFP10398 606 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 OR1D2P34982 312 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 E2F2Q14209 437 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 XKRXQ6PP77 449 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 AGTRAPQ6RW13 159 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 Q6ZNB5 142 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 LAX1Q8IWV1 398 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 FAM217AQ8IXS0 508 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 OR7G3Q8NG95 312 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 OR7G1Q8NGA0 311 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.87■□□□□ 0.29
SDCBP-202ENST00000413219 TRIM63Q969Q1 353 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 ANGPT4Q9Y264 503 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 MAU2Q9Y6X3 613 aa16.87■□□□□ 0.29
SDCBP-202ENST00000413219 ALPK3Q96L96 1907 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 NT5C1B-RDH14C9J2C7 533 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 H3BM21 787 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 GPR37L1O60883 481 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 CSO75390 466 aaKnown RBP16.86■□□□□ 0.29
SDCBP-202ENST00000413219 CYP7B1O75881 506 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 AP2A2O94973 939 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 C6orf47O95873 294 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 IFNW1P05000 195 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 ZNF8P17098 575 aaPredicted RBP16.86■□□□□ 0.29
SDCBP-202ENST00000413219 LHCGRP22888 699 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 SPINT3P49223 89 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 ZNF763Q0D2J5 394 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 HYAL2Q12891 473 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 PLD1Q13393 1074 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 PDE7AQ13946 482 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 LARS2Q15031 903 aaKnown RBP16.86■□□□□ 0.29
SDCBP-202ENST00000413219 TAF12Q16514 161 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 GLYR1Q49A26 553 aaPredicted RBP16.86■□□□□ 0.29
SDCBP-202ENST00000413219 DGKKQ5KSL6 1271 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 SERPINA13PQ6UXR4 307 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 NOXA1Q86UR1 476 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 RDH10Q8IZV5 341 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 TAGAPQ8N103 731 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 PROKR2Q8NFJ6 384 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 OR9Q1Q8NGQ5 310 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 HUS1BQ8NHY5 278 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 VOPP1Q96AW1 172 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 GPBP1L1Q9HC44 474 aaPredicted RBP16.86■□□□□ 0.29
SDCBP-202ENST00000413219 SNTG1Q9NSN8 517 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 SSR3Q9UNL2 185 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 BACE2Q9Y5Z0 518 aa16.86■□□□□ 0.29
SDCBP-202ENST00000413219 TRBC2A0A5B9 178 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 MANSC4A6NHS7 340 aaPredicted RBP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 ARHGEF33A8MVX0 844 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 TNFRSF10AO00220 468 aa16.85■□□□□ 0.29
SDCBP-202ENST00000413219 CELF2O95319 508 aaKnown RBP16.85■□□□□ 0.29
SDCBP-202ENST00000413219 IL1AP01583 271 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms