RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 EMP2P54851 167 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 RAB38P57729 211 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 CUL3Q13618 768 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 RCN2Q14257 317 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 AP5B1Q2VPB7 878 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 MINDY4Q4G0A6 757 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 C10orf62Q5T681 223 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-206ENST00000412056 OR4C11Q6IEV9 310 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 SCIMPQ6UWF3 145 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 ATG14Q6ZNE5 492 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 CUZD1Q86UP6 607 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 NUDCD3Q8IVD9 361 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 ACOT4Q8N9L9 421 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 RGMAQ96B86 450 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 TBC1D20Q96BZ9 403 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 OR1F2PQ96R84 312 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 SH3GL2Q99962 352 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 CENPKQ9BS16 269 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 NPLQ9BXD5 320 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-206ENST00000412056 ZNF717Q9BY31 904 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-206ENST00000412056 CLK4Q9HAZ1 481 aaKnown RBP13.16□□□□□ -0.3
CPNE1-206ENST00000412056 LANCL2Q9NS86 450 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 SEMA3GQ9NS98 782 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 PSD3Q9NYI0 1048 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 MKL2Q9ULH7 1088 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 SLC12A4Q9UP95 1085 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 MAN2B2Q9Y2E5 1009 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 HS3ST3B1Q9Y662 390 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 CROCCQ5TZA2 2017 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 ASPMQ8IZT6 3477 aa13.16□□□□□ -0.3
CPNE1-206ENST00000412056 TNRC6AQ8NDV7 1962 aaKnown RBP13.16□□□□□ -0.3
CPNE1-206ENST00000412056 FAM227AF5H4B4 570 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 H3BQF6 201 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 MASP2O00187 686 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 BIRC5O15392 142 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 B4GALT2O60909 372 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 EEDO75530 441 aaKnown RBP13.15□□□□□ -0.3
CPNE1-206ENST00000412056 CRCPO75575 148 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 SEMA3DO95025 777 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 HEXBP07686 556 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 FHP07954 510 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 HIST1H1TP22492 207 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-206ENST00000412056 BSGP35613 385 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 WDR4P57081 412 aaKnown RBP13.15□□□□□ -0.3
CPNE1-206ENST00000412056 CHAF1BQ13112 559 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 CHI3L2Q15782 390 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 TBR1Q16650 682 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 ARL13AQ5H913 290 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-206ENST00000412056 CPZQ66K79 652 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 CLEC6AQ6EIG7 209 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 FAM47BQ8NA70 645 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 OR6Y1Q8NGX8 325 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 PPP1R14CQ8TAE6 165 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 MGARPQ8TDB4 240 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 SREK1Q8WXA9 508 aaKnown RBP13.15□□□□□ -0.3
CPNE1-206ENST00000412056 THAP4Q8WY91 577 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 TTC9Q92623 222 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 EXTL1Q92935 676 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 ATP6V1G3Q96LB4 118 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 CATSPER2Q96P56 530 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 CSF3RQ99062 836 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 PAIP2Q9BPZ3 127 aaKnown RBP13.15□□□□□ -0.3
CPNE1-206ENST00000412056 MAPKAP1Q9BPZ7 522 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 TRMOQ9BU70 441 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 MRPL1Q9BYD6 325 aaKnown RBP13.15□□□□□ -0.3
CPNE1-206ENST00000412056 ACPTQ9BZG2 426 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 ROGDIQ9GZN7 287 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 BRF2Q9HAW0 419 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 ZNF446Q9NWS9 450 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 P4HTMQ9NXG6 502 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 DAPP1Q9UN19 280 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 FIS1Q9Y3D6 152 aa13.15□□□□□ -0.3
CPNE1-206ENST00000412056 CACNA1GO43497 2377 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 A0A0A6YYD5 115 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 ARGFXA6NJG6 315 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 PSMD12O00232 456 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-206ENST00000412056 ALOX12BO75342 701 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 ULK1O75385 1050 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 IGHEP01854 428 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 SERPINE1P05121 402 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 HSD3B1P14060 373 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 IL10P22301 178 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 HSD3B2P26439 372 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 SERPINB3P29508 390 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 HNRNPFP52597 415 aaKnown RBP13.14□□□□□ -0.31
CPNE1-206ENST00000412056 ARFIP1P53367 373 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 LIM2P55344 173 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 HNRNPH2P55795 449 aaKnown RBP13.14□□□□□ -0.31
CPNE1-206ENST00000412056 RHAGQ02094 409 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 RHDQ02161 417 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 EEF1A2Q05639 463 aaKnown RBP13.14□□□□□ -0.31
CPNE1-206ENST00000412056 CSTF3Q12996 717 aaKnown RBP13.14□□□□□ -0.31
CPNE1-206ENST00000412056 ABRAXAS2Q15018 415 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 TUBB8Q3ZCM7 444 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 HHATQ5VTY9 493 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 KIRREL2Q6UWL6 708 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 LANCL3Q6ZV70 420 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 TMEM52Q8NDY8 209 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 TSLPQ969D9 159 aa13.14□□□□□ -0.31
CPNE1-206ENST00000412056 C8orf44Q96CB5 159 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms