RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 C4orf51C9J302 202 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 CLDN4O14493 209 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 JRKO75564 520 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 CDC123O75794 336 aaPredicted RBP10.28□□□□□ -0.76
CHMP3-205ENST00000409810 CEACAM4O75871 244 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 SEMA3DO95025 777 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 TBX6O95947 436 aaPredicted RBP10.28□□□□□ -0.76
CHMP3-205ENST00000409810 B3GALT4O96024 378 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 KRT6AP02538 564 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 KRT6BP04259 564 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 ALPPP05187 535 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 COX6A1P12074 109 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 CPA3P15088 417 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 ITGA3P26006 1051 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 CERS1P27544 350 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 HMOX2P30519 316 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 SSR2P43308 183 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 KRT6CP48668 564 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 PGDP52209 483 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 PKNOX1P55347 436 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 DNAJB13P59910 316 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 RPS13P62277 151 aaKnown RBP10.28□□□□□ -0.76
CHMP3-205ENST00000409810 ZNF844Q08AG5 666 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 CUL3Q13618 768 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 CEP85LQ5SZL2 805 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 DEPDC1Q5TB30 811 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 LIPMQ5VYY2 423 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 FAAH2Q6GMR7 532 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 TCTN3Q6NUS6 607 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 TMEM205Q6UW68 189 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 LRIG3Q6UXM1 1119 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 GPRIN3Q6ZVF9 776 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 HPS6Q86YV9 775 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 HOMEZQ8IX15 550 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 GALNT16Q8N428 558 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 CCNYL1Q8N7R7 359 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 BANPQ8N9N5 519 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 PLPP5Q8NEB5 264 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 C7orf57Q8NEG2 295 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 C8orf44Q96CB5 159 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 QRFPRQ96P65 431 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 SLC29A3Q9BZD2 475 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 STMN4Q9H169 189 aaPredicted RBP10.28□□□□□ -0.76
CHMP3-205ENST00000409810 OR51B5Q9H339 312 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 LYRM4Q9HD34 91 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 NMRK1Q9NWW6 199 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 AHSPQ9NZD4 102 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 PLLPQ9Y342 182 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 ZNF451Q9Y4E5 1061 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 MMACHCQ9Y4U1 282 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 BOD1L1Q8NFC6 3051 aa10.28□□□□□ -0.76
CHMP3-205ENST00000409810 IGHV1-45A0A0A0MS14 117 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 GOLGA6L10A6NI86 522 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 A6NL46 340 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 G3V2L1 256 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 PRMT3O60678 531 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 B4GALT2O60909 372 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 SH3BGRLO75368 114 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 CRCPO75575 148 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 OR4F21O95013 312 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 SCELO95171 688 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 ENO1P06733 434 aaKnown RBP10.27□□□□□ -0.77
CHMP3-205ENST00000409810 ICAM2P13598 275 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 HSD3B1P14060 373 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 TSPAN8P19075 237 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 HIST1H1TP22492 207 aaPredicted RBP10.27□□□□□ -0.77
CHMP3-205ENST00000409810 ATP5A1P25705 553 aaKnown RBP10.27□□□□□ -0.77
CHMP3-205ENST00000409810 HSD3B2P26439 372 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 LIM2P55344 173 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 SOX8P57073 446 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 RHAGQ02094 409 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 MYBPC3Q14896 1274 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 ABRAXAS2Q15018 415 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 NSDHLQ15738 373 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 VWA5B1Q5TIE3 1220 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 OR4C11Q6IEV9 310 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 LETMD1Q6P1Q0 360 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 RIPOR1Q6ZS17 1223 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 RPS27LQ71UM5 84 aaKnown RBP10.27□□□□□ -0.77
CHMP3-205ENST00000409810 CPEB2Q7Z5Q1 589 aaKnown RBP10.27□□□□□ -0.77
CHMP3-205ENST00000409810 TMEM151BQ8IW70 566 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 ZNF595Q8IYB9 648 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 ZCCHC7Q8N3Z6 543 aaKnown RBP10.27□□□□□ -0.77
CHMP3-205ENST00000409810 FDCSPQ8NFU4 85 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 SELENOMQ8WWX9 145 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 PTCHD1Q96NR3 888 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 ZIM3Q96PE6 472 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 LPAR4Q99677 370 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 TUBB6Q9BUF5 446 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 SEMA4CQ9C0C4 833 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 LHPPQ9H008 270 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 ZNF700Q9H0M5 742 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 CENPHQ9H3R5 247 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 BRF2Q9HAW0 419 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 ZNF160Q9HCG1 818 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 PRDM9Q9NQV7 894 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 PRDM7Q9NQW5 492 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 LANCL2Q9NS86 450 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 OXSMQ9NWU1 459 aa10.27□□□□□ -0.77
CHMP3-205ENST00000409810 MS4A12Q9NXJ0 267 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms